Information for 4-AATCCGATTA (Motif 4)

C T G A C G T A C A G T A G T C A T G C A C T G G C T A C G A T A C G T T C G A
Reverse Opposite:
A G C T C G T A C G T A C G A T G T A C T A C G C T A G G C T A A C G T A G C T
p-value:1e-13
log p-value:-3.210e+01
Information Content per bp:1.731
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.89%
Number of Background Sequences with motif54.9
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets35.9 +/- 19.8bp
Average Position of motif in Background46.2 +/- 42.2bp
Strand Bias (log2 ratio + to - strand density)1.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:1
Score:0.87
Offset:-1
Orientation:forward strand
Alignment:-AATCCGATTA-
TAATCHGATTAC
 A C G T C T G A C G T A C A G T A G T C A T G C A C T G G C T A C G A T A C G T T C G A A C G T
G C A T C T G A T G C A G A C T A G T C G T A C T C A G C G T A A G C T A C G T G C T A G T A C

Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer

Match Rank:2
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-AATCCGATTA-
TAATYNRATTAR
 A C G T C T G A C G T A C A G T A G T C A T G C A C T G G C T A C G A T A C G T T C G A A C G T
G C A T C G T A C G T A G A C T A G C T G C A T T C G A T C G A A C G T G A C T C G T A C T A G

Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer

Match Rank:3
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-AATCCGATTA-
TAATTNVATTAN
 A C G T C T G A C G T A C A G T A G T C A T G C A C T G G C T A C G A T A C G T T C G A A C G T
G C A T C T G A C G T A A G C T A C G T G T A C T C G A C T G A A C G T G A C T C G T A C A T G

PH0126.1_Obox6/Jaspar

Match Rank:4
Score:0.77
Offset:-4
Orientation:reverse strand
Alignment:----AATCCGATTA-
CNATAATCCGNTTNT
 A C G T A C G T A C G T A C G T C T G A C G T A C A G T A G T C A T G C A C T G G C T A C G A T A C G T T C G A A C G T
T A G C C T G A G C T A C G A T C G T A C G T A A C G T G T A C A G T C A T C G G A C T C G A T G A C T C G A T C A G T

Phox2b/MA0681.1/Jaspar

Match Rank:5
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-AATCCGATTA
TAATTAAATTA
 A C G T C T G A C G T A C A G T A G T C A T G C A C T G G C T A C G A T A C G T T C G A
G C A T C G T A C T G A A G C T A G C T C T G A T C G A C T G A A G C T G A C T C G T A

PHOX2A/MA0713.1/Jaspar

Match Rank:6
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-AATCCGATTA
TAATTAAATTA
 A C G T C T G A C G T A C A G T A G T C A T G C A C T G G C T A C G A T A C G T T C G A
G C A T C G T A T C G A A G C T A G C T C T G A T C G A C T G A G A C T G A C T C G T A

PROP1/MA0715.1/Jaspar

Match Rank:7
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-AATCCGATTA
TAATTAAATTA
 A C G T C T G A C G T A C A G T A G T C A T G C A C T G G C T A C G A T A C G T T C G A
G C A T C T G A C G T A G A C T C A G T G C T A C T G A C G T A A G C T C G A T C G T A

Dmbx1/MA0883.1/Jaspar

Match Rank:8
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------AATCCGATTA-
NNNATTAATCCGNTTNA
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A C A G T A G T C A T G C A C T G G C T A C G A T A C G T T C G A A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:9
Score:0.71
Offset:-6
Orientation:reverse strand
Alignment:------AATCCGATTA-
NNNATTAATCCGNTTNA
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A C A G T A G T C A T G C A C T G G C T A C G A T A C G T T C G A A C G T
G C A T C G A T T A G C T G C A G A C T C G A T C G T A C G T A A C G T A T G C A G T C A C T G C A T G G C A T G A C T G A T C C G T A

OTX1/MA0711.1/Jaspar

Match Rank:10
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:AATCCGATTA-
---CGGATTAN
 C T G A C G T A C A G T A G T C A T G C A C T G G C T A C G A T A C G T T C G A A C G T
A C G T A C G T A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A