Information for 2-CATTATAAGTTAC (Motif 3)

A G T C C G T A A C G T A G C T G C T A A C G T C G T A C G T A A C T G C G A T A C G T C G T A A G T C
Reverse Opposite:
T A C G C G A T C G T A C G T A G T A C A C G T A C G T C G T A C G A T C T G A C G T A A C G T C T A G
p-value:1e-15
log p-value:-3.666e+01
Information Content per bp:1.832
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.1 +/- 27.8bp
Average Position of motif in Background60.9 +/- 16.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0079.1_Sry_1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---CATTATAAGTTAC
NANTATTATAATTNNN
 A C G T A C G T A C G T A G T C C G T A A C G T A G C T G C T A A C G T C G T A C G T A A C T G C G A T A C G T C G T A A G T C
A C T G G C T A G C T A G A C T C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T G T C A C G A T T G C A

PB0064.1_Sox14_1/Jaspar

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CATTATAAGTTAC
NNTAATTATAATTNNN
 A C G T A C G T A C G T A G T C C G T A A C G T A G C T G C T A A C G T C G T A C G T A A C T G C G A T A C G T C G T A A G T C
C A T G G T C A G C A T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C T A G G T A C

PB0069.1_Sox21_1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CATTATAAGTTAC
TTTAATTATAATTAAG
 A C G T A C G T A C G T A G T C C G T A A C G T A G C T G C T A A C G T C G T A C G T A A C T G C G A T A C G T C G T A A G T C
G A C T G C A T G A C T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C A T G

PB0174.1_Sox30_2/Jaspar

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CATTATAAGTTAC
TAAGATTATAATACGG
 A C G T A C G T A C G T A G T C C G T A A C G T A G C T G C T A A C G T C G T A C G T A A C T G C G A T A C G T C G T A A G T C
G A C T G T C A C G T A A C T G G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G C A T A G C T A C G T A C G

Nkx2-5/MA0063.1/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CATTATAAGTTAC
----TTAATTG--
 A G T C C G T A A C G T A G C T G C T A A C G T C G T A C G T A A C T G C G A T A C G T C G T A A G T C
A C G T A C G T A C G T A C G T C G A T A G C T C G T A C G T A A C G T G C A T C A T G A C G T A C G T

PB0176.1_Sox5_2/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CATTATAAGTTAC--
TATCATAATTAAGGA
 A G T C C G T A A C G T A G C T G C T A A C G T C G T A C G T A A C T G C G A T A C G T C G T A A G T C A C G T A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A

PH0038.1_Hlx/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CATTATAAGTTAC-
CCATAATTAATTACA
 A C G T A G T C C G T A A C G T A G C T G C T A A C G T C G T A C G T A A C T G C G A T A C G T C G T A A G T C A C G T
G T A C G T A C G T C A G A C T G C T A C G T A G A C T G C A T C T G A C T G A G C A T C G A T C T G A G A T C G T C A

Arid3b/MA0601.1/Jaspar

Match Rank:8
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CATTATAAGTTAC
-ATATTAATTAA-
 A G T C C G T A A C G T A G C T G C T A A C G T C G T A C G T A A C T G C G A T A C G T C G T A A G T C
A C G T C G T A C G A T G C T A C G A T A C G T C G T A C G T A C G A T G C A T C G T A C G T A A C G T

HLTF/MA0109.1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:CATTATAAGTTAC
--NNATAAGGNN-
 A G T C C G T A A C G T A G C T G C T A A C G T C G T A C G T A A C T G C G A T A C G T C G T A A G T C
A C G T A C G T C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CATTATAAGTTAC
CTATTTTTGG----
 A C G T A G T C C G T A A C G T A G C T G C T A A C G T C G T A C G T A A C T G C G A T A C G T C G T A A G T C
A T G C A G C T G T C A C G A T C G A T A G C T G A C T G C A T C T G A C A T G A C G T A C G T A C G T A C G T