Information for 4-CCCGAGGCTGCCG (Motif 8)

A G T C G T A C A G T C C T A G G C T A A C T G A T C G G T A C A C G T C A T G T A G C A G T C A C T G
Reverse Opposite:
G T A C C T A G A C T G G A T C G T C A A C T G A T G C A G T C C G A T A G T C T A C G A C T G A C T G
p-value:1e-10
log p-value:-2.439e+01
Information Content per bp:1.781
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif1.95%
Number of Background Sequences with motif116.4
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets37.8 +/- 20.1bp
Average Position of motif in Background49.2 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:1
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCCGAGGCTGCCG
AGCCTCAGGCA----
 A C G T A C G T A G T C G T A C A G T C C T A G G C T A A C T G A T C G G T A C A C G T C A T G T A G C A G T C A C T G
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--CCCGAGGCTGCCG
AGCCTCAGGCA----
 A C G T A C G T A G T C G T A C A G T C C T A G G C T A A C T G A T C G G T A C A C G T C A T G T A G C A G T C A C T G
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCCGAGGCTGCCG
CGCCTCAGGCA----
 A C G T A C G T A G T C G T A C A G T C C T A G G C T A A C T G A T C G G T A C A C G T C A T G T A G C A G T C A C T G
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CCCGAGGCTGCCG
ATTGCCTGAGGCAAT--
 A C G T A C G T A C G T A C G T A G T C G T A C A G T C C T A G G C T A A C T G A T C G G T A C A C G T C A T G T A G C A G T C A C T G
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T A C G T A C G T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CCCGAGGCTGCCG
WTGSCCTSAGGS-----
 A C G T A C G T A C G T A C G T A G T C G T A C A G T C C T A G G C T A A C T G A T C G G T A C A C G T C A T G T A G C A G T C A C T G
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCCGAGGCTGCCG
ATGCCCTGAGGC-----
 A C G T A C G T A C G T A C G T A G T C G T A C A G T C C T A G G C T A A C T G A T C G G T A C A C G T C A T G T A G C A G T C A C T G
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T A C G T A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CCCGAGGCTGCCG
ANTGCCTGAGGCAAN--
 A C G T A C G T A C G T A C G T A G T C G T A C A G T C C T A G G C T A A C T G A T C G G T A C A C G T C A T G T A G C A G T C A C T G
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T A C G T A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCCGAGGCTGCCG
ATTGCCTGAGGCGAA--
 A C G T A C G T A C G T A C G T A G T C G T A C A G T C C T A G G C T A A C T G A T C G G T A C A C G T C A T G T A G C A G T C A C T G
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CCCGAGGCTGCCG
TGCCCCCGGGCA----
 A C G T A C G T A C G T A G T C G T A C A G T C C T A G G C T A A C T G A T C G G T A C A C G T C A T G T A G C A G T C A C T G
G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.55
Offset:3
Orientation:forward strand
Alignment:CCCGAGGCTGCCG
---TWGTCTGV--
 A G T C G T A C A G T C C T A G G C T A A C T G A T C G G T A C A C G T C A T G T A G C A G T C A C T G
A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T