Information for 2-CGGCTGCTCA (Motif 3)

G A T C A T C G C A T G A T G C G A C T A C T G A G T C C A G T A T G C C T G A
Reverse Opposite:
A G C T A T C G G T C A A C T G T G A C C T G A T A C G G T A C T A G C C T A G
p-value:1e-12
log p-value:-2.959e+01
Information Content per bp:1.728
Number of Target Sequences with motif71.0
Percentage of Target Sequences with motif7.69%
Number of Background Sequences with motif1383.1
Percentage of Background Sequences with motif2.85%
Average Position of motif in Targets44.4 +/- 25.9bp
Average Position of motif in Background49.6 +/- 27.6bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/MA0506.1/Jaspar

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CGGCTGCTCA
GCGCCTGCGCA
 A C G T G A T C A T C G C A T G A T G C G A C T A C T G A G T C C A G T A T G C C T G A
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CGGCTGCTCA----
----TGCCCAGNHW
 G A T C A T C G C A T G A T G C G A C T A C T G A G T C C A G T A T G C C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CGGCTGCTCA----
----TGCTGACTCA
 G A T C A T C G C A T G A T G C G A C T A C T G A G T C C A G T A T G C C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CGGCTGCTCA----
CGAACAGTGCTCACTAT
 A C G T A C G T A C G T G A T C A T C G C A T G A T G C G A C T A C T G A G T C C A G T A T G C C T G A A C G T A C G T A C G T A C G T
A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

Ascl2/MA0816.1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CGGCTGCTCA
AGCAGCTGCT--
 A C G T A C G T G A T C A T C G C A T G A T G C G A C T A C T G A G T C C A G T A T G C C T G A
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CGGCTGCTCA-
-CNGTCCTCCC
 G A T C A T C G C A T G A T G C G A C T A C T G A G T C C A G T A T G C C T G A A C G T
A C G T A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C

PB0003.1_Ascl2_1/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CGGCTGCTCA--
CTCAGCAGCTGCTACTG
 A C G T A C G T A C G T A C G T A C G T G A T C A T C G C A T G A T G C G A C T A C T G A G T C C A G T A T G C C T G A A C G T A C G T
A G T C A C G T A G T C T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T G A C G A T C G C A T C A T G

PB0133.1_Hic1_2/Jaspar

Match Rank:8
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CGGCTGCTCA-----
GGGTGTGCCCAAAAGG
 A C G T G A T C A T C G C A T G A T G C G A C T A C T G A G T C C A G T A T G C C T G A A C G T A C G T A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CGGCTGCTCA
----NGCTN-
 G A T C A T C G C A T G A T G C G A C T A C T G A G T C C A G T A T G C C T G A
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CGGCTGCTCA
--GCTTCC--
 G A T C A T C G C A T G A T G C G A C T A C T G A G T C C A G T A T G C C T G A
A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T