Information for 9-GTGTGAGACAGGA (Motif 17)

A C T G C G A T A C T G A C G T A C T G C G T A A T C G C T G A A G T C C G T A A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A C G T A C T G A G C T A T G C A C G T A G T C C G T A A G T C C G T A A G T C
p-value:1e-8
log p-value:-1.905e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.0 +/- 16.9bp
Average Position of motif in Background87.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--GTGTGAGACAGGA
AGGTGNCAGACAG--
 A C G T A C G T A C T G C G A T A C T G A C G T A C T G C G T A A T C G C T G A A G T C C G T A A C T G A C T G C G T A
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GTGTGAGACAGGA
AGGTGHCAGACA---
 A C G T A C G T A C T G C G A T A C T G A C G T A C T G C G T A A T C G C T G A A G T C C G T A A C T G A C T G C G T A
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T A C G T A C G T

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:3
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GTGTGAGACAGGA
---TGACTCAGCA
 A C T G C G A T A C T G A C G T A C T G C G T A A T C G C T G A A G T C C G T A A C T G A C T G C G T A
A C G T A C G T A C G T A G C T A C T G C G T A A T G C C G A T G T A C C T G A A C T G A T G C G C T A

MGA/MA0801.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GTGTGAGACAGGA
AGGTGTGA-------
 A C G T A C G T A C T G C G A T A C T G A C G T A C T G C G T A A T C G C T G A A G T C C G T A A C T G A C T G C G T A
C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOSL1/MA0477.1/Jaspar

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GTGTGAGACAGGA
-GGTGACTCATG-
 A C T G C G A T A C T G A C G T A C T G C G T A A T C G C T G A A G T C C G T A A C T G A C T G C G T A
A C G T C T A G T C A G A C G T A C T G C G T A T A G C A C G T G T A C C G T A A C G T T A C G A C G T

TBX1/MA0805.1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GTGTGAGACAGGA
AGGTGTGA-------
 A C G T A C G T A C T G C G A T A C T G A C G T A C T G C G T A A T C G C T G A A G T C C G T A A C T G A C T G C G T A
C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nfe2l2/MA0150.2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GTGTGAGACAGGA
CAGCATGACTCAGCA
 A C G T A C G T A C T G C G A T A C T G A C G T A C T G C G T A A T C G C T G A A G T C C G T A A C T G A C T G C G T A
G T A C C T G A T A C G T G A C T C G A A C G T A C T G C G T A A T G C G C A T G A T C C T G A T A C G A T G C C G T A

JUNB/MA0490.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GTGTGAGACAGGA
GGATGACTCAT--
 A C T G C G A T A C T G A C G T A C T G C G T A A T C G C T G A A G T C C G T A A C T G A C T G C G T A
C A T G C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A C G T A C G T A C G T

MAF::NFE2/MA0501.1/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GTGTGAGACAGGA----
--ATGACTCAGCAATTT
 A C T G C G A T A C T G A C G T A C T G C G T A A T C G C T G A A G T C C G T A A C T G A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T T C G A A C G T A C T G C G T A A T G C C G A T G T A C C G T A C A T G A T G C C T G A C T G A C G A T G C A T G A C T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:10
Score:0.59
Offset:6
Orientation:forward strand
Alignment:GTGTGAGACAGGA---
------AACAGGAAGT
 A C T G C G A T A C T G A C G T A C T G C G T A A T C G C T G A A G T C C G T A A C T G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T