Information for 4-GGCCCAACGA (Motif 9)

A C T G A C T G G T A C A T G C A G T C C G T A C T G A A T G C T C A G T C G A
Reverse Opposite:
A G C T A G T C A T C G A G C T A C G T A C T G A T C G A C T G A G T C A G T C
p-value:1e-8
log p-value:-1.978e+01
Information Content per bp:1.861
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.81%
Number of Background Sequences with motif115.2
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets56.9 +/- 23.1bp
Average Position of motif in Background49.1 +/- 28.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GGCCCAACGA
TGGGGCCCAC--
 A C G T A C G T A C T G A C T G G T A C A T G C A G T C C G T A C T G A A T G C T C A G T C G A
G A C T C T A G A C T G A C T G T A C G A G T C A G T C A G T C C T G A A T G C A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGCCCAACGA--
GGACCACCCACG
 A C T G A C T G G T A C A T G C A G T C C G T A C T G A A T G C T C A G T C G A A C G T A C G T
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

PB0133.1_Hic1_2/Jaspar

Match Rank:3
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----GGCCCAACGA-
GGGTGTGCCCAAAAGG
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G G T A C A T G C A G T C C G T A C T G A A T G C T C A G T C G A A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

ZBTB7C/MA0695.1/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGCCCAACGA-
GCGACCACCGAA
 A C G T A C T G A C T G G T A C A T G C A G T C C G T A C T G A A T G C T C A G T C G A A C G T
C T A G T A G C C T A G G T C A G T A C A G T C G T C A G T A C G A T C T C A G G T C A T G C A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGCCCAACGA
AGGCCTAG---
 A C G T A C T G A C T G G T A C A T G C A G T C C G T A C T G A A T G C T C A G T C G A
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T

ZBTB7B/MA0694.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GGCCCAACGA-
GCGACCACCGAA
 A C G T A C T G A C T G G T A C A T G C A G T C C G T A C T G A A T G C T C A G T C G A A C G T
C T A G T A G C C T A G G T C A T G A C A T G C G T C A G T A C A G T C T C A G G C T A G T C A

ZBTB7A/MA0750.1/Jaspar

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGCCCAACGA
GGCGACCACCGA
 A C G T A C G T A C T G A C T G G T A C A T G C A G T C C G T A C T G A A T G C T C A G T C G A
A C T G T C A G A T G C C T A G G T C A A G T C A T G C G T C A A G T C G T A C C A T G T G C A

NFYB/MA0502.1/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----GGCCCAACGA-
AAATGGACCAATCAG
 A C G T A C G T A C G T A C G T A C T G A C T G G T A C A T G C A G T C C G T A C T G A A T G C T C A G T C G A A C G T
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

PLAG1/MA0163.1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GGCCCAACGA--
GGGGCCCAAGGGGG
 A C G T A C G T A C T G A C T G G T A C A T G C A G T C C G T A C T G A A T G C T C A G T C G A A C G T A C G T
A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G

PB0120.1_Foxj1_2/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GGCCCAACGA---
ATGTCACAACAACAC
 A C G T A C G T A C T G A C T G G T A C A T G C A G T C C G T A C T G A A T G C T C A G T C G A A C G T A C G T A C G T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C