Information for 6-CTGTCCTGACCGC (Motif 14)

A G T C A C G T A C T G C G A T A G T C A G T C C G A T A C T G C G T A A G T C A G T C T C A G T A G C
Reverse Opposite:
A T C G A G T C C T A G A C T G A C G T A G T C C G T A A C T G A C T G C G T A G T A C C G T A A C T G
p-value:1e-6
log p-value:-1.547e+01
Information Content per bp:1.830
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif23.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets45.3 +/- 25.1bp
Average Position of motif in Background50.1 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTGTCCTGACCGC
-TGACCTYA----
 A G T C A C G T A C T G C G A T A G T C A G T C C G A T A C T G C G T A A G T C A G T C T C A G T A G C
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:CTGTCCTGACCGC
----CCAGACAG-
 A G T C A C G T A C T G C G A T A G T C A G T C C G A T A C T G C G T A A G T C A G T C T C A G T A G C
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:CTGTCCTGACCGC-
----CCAGACRSVB
 A G T C A C G T A C T G C G A T A G T C A G T C C G A T A C T G C G T A A G T C A G T C T C A G T A G C A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

SMAD3/MA0795.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTGTCCTGACCGC
-TGTCTAGACG--
 A G T C A C G T A C T G C G A T A G T C A G T C C G A T A C T G C G T A A G T C A G T C T C A G T A G C
A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTGTCCTGACCGC
-TGACCT------
 A G T C A C G T A C T G C G A T A G T C A G T C C G A T A C T G C G T A A G T C A G T C T C A G T A G C
A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTGTCCTGACCGC---
CAAATCCAGACATCACA
 A C G T A G T C A C G T A C T G C G A T A G T C A G T C C G A T A C T G C G T A A G T C A G T C T C A G T A G C A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

ZEB1/MA0103.2/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTGTCCTGACCGC
CCTCACCTG-----
 A C G T A G T C A C G T A C T G C G A T A G T C A G T C C G A T A C T G C G T A A G T C A G T C T C A G T A G C
T G A C A G T C C G A T A G T C C G T A A G T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CTGTCCTGACCGC
NNACTTACCTN-----
 A C G T A C G T A C G T A G T C A C G T A C T G C G A T A G T C A G T C C G A T A C T G C G T A A G T C A G T C T C A G T A G C
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTGTCCTGACCGC
-ATGCCAGACN--
 A G T C A C G T A C T G C G A T A G T C A G T C C G A T A C T G C G T A A G T C A G T C T C A G T A G C
A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:CTGTCCTGACCGC-----
-TGTCGTGACCCCTTAAT
 A G T C A C G T A C T G C G A T A G T C A G T C C G A T A C T G C G T A A G T C A G T C T C A G T A G C A C G T A C G T A C G T A C G T A C G T
A C G T C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T