Information for 5-GCCCTTTACC (Motif 10)

A C T G A G T C A G T C G T A C C G A T A C G T C G A T C T G A A G T C A G T C
Reverse Opposite:
C T A G C T A G G A C T G C T A C G T A C G T A A C T G A C T G C T A G G T A C
p-value:1e-8
log p-value:-1.965e+01
Information Content per bp:1.836
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.93%
Number of Background Sequences with motif135.4
Percentage of Background Sequences with motif0.28%
Average Position of motif in Targets38.6 +/- 25.1bp
Average Position of motif in Background54.3 +/- 26.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTTTACC-
TGACCTTGACCT
 A C G T A C T G A G T C A G T C G T A C C G A T A C G T C G A T C T G A A G T C A G T C A C G T
G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTTTACC-
TGACCTTGACCT
 A C G T A C T G A G T C A G T C G T A C C G A T A C G T C G A T C T G A A G T C A G T C A C G T
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTTTACC---
TGACCTTTGCCCTA
 A C G T A C T G A G T C A G T C G T A C C G A T A C G T C G A T C T G A A G T C A G T C A C G T A C G T A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:4
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCCCTTTACC-
TGACCTTTNCNT
 A C G T A C T G A G T C A G T C G T A C C G A T A C G T C G A T C T G A A G T C A G T C A C G T
A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GCCCTTTACC---
TGACCTTTGCCCCA
 A C G T A C T G A G T C A G T C G T A C C G A T A C G T C G A T C T G A A G T C A G T C A C G T A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G T A C G A T C G T C A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTTTACC----
TGACCTTTGCCCTAN
 A C G T A C T G A G T C A G T C G T A C C G A T A C G T C G A T C T G A A G T C A G T C A C G T A C G T A C G T A C G T
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C

BARHL2/MA0635.1/Jaspar

Match Rank:7
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:GCCCTTTACC
ANCGTTTANN
 A C T G A G T C A G T C G T A C C G A T A C G T C G A T C T G A A G T C A G T C
C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C

PB0200.1_Zfp187_2/Jaspar

Match Rank:8
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCCCTTTACC----
GAGCCCTTGTCCCTAA
 A C G T A C G T A C T G A G T C A G T C G T A C C G A T A C G T C G A T C T G A A G T C A G T C A C G T A C G T A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

Nr5a2/MA0505.1/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GCCCTTTACC--
GCTGACCTTGAACTN
 A C G T A C G T A C G T A C T G A G T C A G T C G T A C C G A T A C G T C G A T C T G A A G T C A G T C A C G T A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCCCTTTACC
TGACCTTGAN-
 A C G T A C T G A G T C A G T C G T A C C G A T A C G T C G A T C T G A A G T C A G T C
G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T