Information for 8-MAGYGCAWGGTGC (Motif 19)

G T A C C G T A A C T G A G T C C T A G A G T C C G T A C G A T A C T G A C T G A C G T A C T G A G T C
Reverse Opposite:
C T A G A G T C C G T A A G T C A G T C C G T A A C G T A C T G A G T C T C A G A G T C A C G T A C T G
p-value:1e-9
log p-value:-2.259e+01
Information Content per bp:1.891
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.7 +/- 29.8bp
Average Position of motif in Background49.0 +/- 13.7bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0137.1_Irf3_2/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:MAGYGCAWGGTGC--
-GGAGAAAGGTGCGA
 G T A C C G T A A C T G A G T C C T A G A G T C C G T A C G A T A C T G A C T G A C G T A C T G A G T C A C G T A C G T
A C G T C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--MAGYGCAWGGTGC-
CANAGNNCAAAGTCCA
 A C G T A C G T G T A C C G T A A C T G A G T C C T A G A G T C C G T A C G A T A C T G A C T G A C G T A C T G A G T C A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

HNF4G/MA0484.1/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-MAGYGCAWGGTGC-
AGAGTCCAAAGTCCA
 A C G T G T A C C G T A A C T G A G T C C T A G A G T C C G T A C G A T A C T G A C T G A C G T A C T G A G T C A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

ZNF143/MA0088.2/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:MAGYGCAWGGTGC---
CAATGCATTGTGGGTA
 G T A C C G T A A C T G A G T C C T A G A G T C C G T A C G A T A C T G A C T G A C G T A C T G A G T C A C G T A C G T A C G T
G A T C C T G A C T G A C A G T A C T G A G T C G C T A G A C T A G C T T C A G G A C T A C T G A C T G A C T G G C A T T C G A

REST/MA0138.2/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----MAGYGCAWGGTGC----
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A C G T G T A C C G T A A C T G A G T C C T A G A G T C C G T A C G A T A C T G A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----MAGYGCAWGGTGC---
GGAGCTGTCCATGGTGCTGA
 A C G T A C G T A C G T A C G T G T A C C G T A A C T G A G T C C T A G A G T C C G T A C G A T A C T G A C T G A C G T A C T G A G T C A C G T A C G T A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:7
Score:0.55
Offset:1
Orientation:forward strand
Alignment:MAGYGCAWGGTGC
-AGGTCAAGGTCA
 G T A C C G T A A C T G A G T C C T A G A G T C C G T A C G A T A C T G A C T G A C G T A C T G A G T C
A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:8
Score:0.53
Offset:7
Orientation:forward strand
Alignment:MAGYGCAWGGTGC--
-------AGGTGTCA
 G T A C C G T A A C T G A G T C C T A G A G T C C G T A C G A T A C T G A C T G A C G T A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G A T C G A G C T A C T G G A C T A G T C C T G A

ID4/MA0824.1/Jaspar

Match Rank:9
Score:0.52
Offset:4
Orientation:reverse strand
Alignment:MAGYGCAWGGTGC-
----GACAGGTGTN
 G T A C C G T A A C T G A G T C C T A G A G T C C G T A C G A T A C T G A C T G A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T C T A G T C G A A G T C C G T A A T C G A T C G A G C T A C T G A G C T G T C A

PB0146.1_Mafk_2/Jaspar

Match Rank:10
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----MAGYGCAWGGTGC
GAAAAAATTGCAAGG---
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G A G T C C T A G A G T C C G T A C G A T A C T G A C T G A C G T A C T G A G T C
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G A C G T A C G T A C G T