Information for 2-TCGACAAGAACGG (Motif 2)

A C G T A G T C A C T G C T G A A G T C C G T A C G T A A T C G C T G A C G T A A G T C A C T G C T A G
Reverse Opposite:
A G T C G T A C A C T G A C G T A G C T A T G C G A C T A C G T C T A G A G C T A G T C C T A G C G T A
p-value:1e-13
log p-value:-3.137e+01
Information Content per bp:1.830
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets27.7 +/- 17.1bp
Average Position of motif in Background41.3 +/- 15.1bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS3/MA0775.1/Jaspar

Match Rank:1
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TCGACAAGAACGG
TTGACAGG-----
 A C G T A G T C A C T G C T G A A G T C C G T A C G T A A T C G C T G A C G T A A G T C A C T G C T A G
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T A C G T

POL001.1_MTE/Jaspar

Match Rank:2
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TCGACAAGAACGG----
TTTCGAGCGGAACGGTCGC
 A C G T A C G T A C G T A G T C A C T G C T G A A G T C C G T A C G T A A T C G C T G A C G T A A G T C A C T G C T A G A C G T A C G T A C G T A C G T
A C G T G A C T A G C T A G T C C T A G C G T A C T A G A G T C A T C G T A C G C G T A C T A G A G T C A C T G A T C G C G A T G A T C T A C G A G C T

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TCGACAAGAACGG
TTGACAGC-----
 A C G T A G T C A C T G C T G A A G T C C G T A C G T A A T C G C T G A C G T A A G T C A C T G C T A G
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TCGACAAGAACGG
TTGACAG------
 A C G T A G T C A C T G C T G A A G T C C G T A C G T A A T C G C T G A C G T A A G T C A C T G C T A G
G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0023.1_Gata6_1/Jaspar

Match Rank:5
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----TCGACAAGAACGG
TATAGAGATAAGAATTG
 A C G T A C G T A C G T A C G T A C G T A G T C A C T G C T G A A G T C C G T A C G T A A T C G C T G A C G T A A G T C A C T G C T A G
C G A T G T C A C G A T T G C A C A G T G C T A A C T G C G T A A G C T C G T A C G T A A T C G T G C A C T G A C G A T G C A T T C A G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.50
Offset:3
Orientation:forward strand
Alignment:TCGACAAGAACGG
---CCAGGAACAG
 A C G T A G T C A C T G C T G A A G T C C G T A C G T A A T C G C T G A C G T A A G T C A C T G C T A G
A C G T A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:7
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TCGACAAGAACGG
RHTGWCAR------
 A C G T A C G T A G T C A C T G C T G A A G T C C G T A C G T A A T C G C T G A C G T A A G T C A C T G C T A G
C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

PB0045.1_Myb_1/Jaspar

Match Rank:8
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:TCGACAAGAACGG-------
---NNNNTAACGGTTNNNAN
 A C G T A G T C A C T G C T G A A G T C C G T A C G T A A T C G C T G A C G T A A G T C A C T G C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A C T G A C G T A C G T A G A C T C T G A C G T A A G T C A T C G C A T G G A C T G A C T C A G T G T A C G T A C G C T A C G A T

Gata1/MA0035.3/Jaspar

Match Rank:9
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-TCGACAAGAACGG
ANAGATAAGAA---
 A C G T A C G T A G T C A C T G C T G A A G T C C G T A C G T A A T C G C T G A C G T A A G T C A C T G C T A G
C T G A T A G C C G T A A C T G C G T A A C G T C G T A C T G A T C A G T C G A T C G A A C G T A C G T A C G T

PB0021.1_Gata3_1/Jaspar

Match Rank:10
Score:0.48
Offset:-6
Orientation:forward strand
Alignment:------TCGACAAGAACGG---
TTTTTAGAGATAAGAAATAAAG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G C T G A A G T C C G T A C G T A A T C G C T G A C G T A A G T C A C T G C T A G A C G T A C G T A C G T
A C G T C A G T G C A T C A G T C G A T C T G A C A T G G C T A A C T G C G T A C G A T G C T A C G T A T A C G T G C A C T G A G C T A A C G T C G T A G T C A T C G A C A T G