Information for 1-GGGAAAGGGC (Motif 4)

C T A G A T C G A C T G C G T A C G T A C G T A A C T G A C T G A T C G A G T C
Reverse Opposite:
C T A G A T G C G T A C A G T C C G A T A C G T A C G T T G A C T A G C A G T C
p-value:1e-12
log p-value:-2.991e+01
Information Content per bp:1.888
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.25%
Number of Background Sequences with motif270.8
Percentage of Background Sequences with motif0.56%
Average Position of motif in Targets46.8 +/- 28.7bp
Average Position of motif in Background49.1 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GGGAAAGGGC-
TGGGGAAGGGCM
 A C G T C T A G A T C G A C T G C G T A C G T A C G T A A C T G A C T G A T C G A G T C A C G T
G A C T C T A G C T A G C T A G A C T G T C G A C T G A C T A G C T A G C T A G G T A C G T C A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:2
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---GGGAAAGGGC-
TAGGGCAAAGGTCA
 A C G T A C G T A C G T C T A G A T C G A C T G C G T A C G T A C G T A A C T G A C T G A T C G A G T C A C G T
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:3
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----GGGAAAGGGC-
GTAGGGCAAAGGTCA
 A C G T A C G T A C G T A C G T C T A G A T C G A C T G C G T A C G T A C G T A A C T G A C T G A T C G A G T C A C G T
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:4
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GGGAAAGGGC-
TGGGGCAAAGGTCA
 A C G T A C G T A C G T C T A G A T C G A C T G C G T A C G T A C G T A A C T G A C T G A T C G A G T C A C G T
C A G T C T A G C A T G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GGGAAAGGGC-
ANGNAAAGGTCA
 A C G T C T A G A T C G A C T G C G T A C G T A C G T A A C T G A C T G A T C G A G T C A C G T
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

PB0137.1_Irf3_2/Jaspar

Match Rank:6
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GGGAAAGGGC---
GGAGAAAGGTGCGA
 A C G T C T A G A T C G A C T G C G T A C G T A C G T A A C T G A C T G A T C G A G T C A C G T A C G T A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GGGAAAGGGC
CSTGGGAAAD---
 A C G T A C G T A C G T C T A G A T C G A C T G C G T A C G T A C G T A A C T G A C T G A T C G A G T C
A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----GGGAAAGGGC
GAAAGTGAAAGT--
 A C G T A C G T A C G T A C G T C T A G A T C G A C T G C G T A C G T A C G T A A C T G A C T G A T C G A G T C
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:9
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GGGAAAGGGC
AGAAAGTGAAAGTGA
 A C G T A C G T A C G T A C G T A C G T C T A G A T C G A C T G C G T A C G T A C G T A A C T G A C T G A T C G A G T C
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGGAAAGGGC-
AGGTCAAGGTCA
 A C G T C T A G A T C G A C T G C G T A C G T A C G T A A C T G A C T G A T C G A G T C A C G T
C T G A C T A G A C T G G C A T A T G C C G T A C T G A C T A G A C T G A C G T A G T C C T G A