Information for 8-CGCAGCCCAG (Motif 17)

G T A C C A T G G T A C C T G A A C T G A T G C A T G C G T A C G T C A T C A G
Reverse Opposite:
A G T C C A G T C A T G A T C G T A C G A G T C G A C T A C T G G T A C A C T G
p-value:1e-8
log p-value:-1.894e+01
Information Content per bp:1.743
Number of Target Sequences with motif39.0
Percentage of Target Sequences with motif4.37%
Number of Background Sequences with motif725.4
Percentage of Background Sequences with motif1.49%
Average Position of motif in Targets48.1 +/- 26.2bp
Average Position of motif in Background51.2 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:CGCAGCCCAG---
---TGCCCAGNHW
 G T A C C A T G G T A C C T G A A C T G A T G C A T G C G T A C G T C A T C A G A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-CGCAGCCCAG----
TCCCAGMCRAGCCCC
 A C G T G T A C C A T G G T A C C T G A A C T G A T G C A T G C G T A C G T C A T C A G A C G T A C G T A C G T A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CGCAGCCCAG
-BCAGACWA-
 G T A C C A T G G T A C C T G A A C T G A T G C A T G C G T A C G T C A T C A G
A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CGCAGCCCAG
--CAGCC---
 G T A C C A T G G T A C C T G A A C T G A T G C A T G C G T A C G T C A T C A G
A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CGCAGCCCAG---
--AAGGCAAGTGT
 G T A C C A T G G T A C C T G A A C T G A T G C A T G C G T A C G T C A T C A G A C G T A C G T A C G T
A C G T A C G T T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGCAGCCCAG
CACAGN----
 G T A C C A T G G T A C C T G A A C T G A T G C A T G C G T A C G T C A T C A G
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CGCAGCCCAG
NGAAGC----
 G T A C C A T G G T A C C T G A A C T G A T G C A T G C G T A C G T C A T C A G
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CGCAGCCCAG
-CGTGCCAAG
 G T A C C A T G G T A C C T G A A C T G A T G C A T G C G T A C G T C A T C A G
A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIC/MA0161.1/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CGCAGCCCAG
---TGCCAA-
 G T A C C A T G G T A C C T G A A C T G A T G C A T G C G T A C G T C A T C A G
A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CGCAGCCCAG
CAAAGGTCAG
 G T A C C A T G G T A C C T G A A C T G A T G C A T G C G T A C G T C A T C A G
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G