Information for 7-CAGTAAATGA (Motif 16)

G T A C C G T A C T A G C G A T C T G A C G T A C G T A A C G T A T C G G T C A
Reverse Opposite:
A C G T A T G C G T C A A C G T A C G T A G C T G C T A A G T C A C G T A C T G
p-value:1e-8
log p-value:-1.974e+01
Information Content per bp:1.858
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif48.9
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets49.4 +/- 32.6bp
Average Position of motif in Background52.0 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--CAGTAAATGA
NACAGGAAAT--
 A C G T A C G T G T A C C G T A C T A G C G A T C T G A C G T A C G T A A C G T A T C G G T C A
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T

Hoxc9/MA0485.1/Jaspar

Match Rank:2
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CAGTAAATGA-
GGCCATAAATCAC
 A C G T A C G T G T A C C G T A C T A G C G A T C T G A C G T A C G T A A C G T A T C G G T C A A C G T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--CAGTAAATGA
NACAGGAAAT--
 A C G T A C G T G T A C C G T A C T A G C G A T C T G A C G T A C G T A A C G T A T C G G T C A
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:4
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CAGTAAATGA
NGYCATAAAWCH
 A C G T A C G T G T A C C G T A C T A G C G A T C T G A C G T A C G T A A C G T A T C G G T C A
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:5
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CAGTAAATGA
GGCCATAAATCA
 A C G T A C G T G T A C C G T A C T A G C G A T C T G A C G T A C G T A A C G T A T C G G T C A
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A

BARHL2/MA0635.1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CAGTAAATGA-
-GCTAAACGGT
 G T A C C G T A C T A G C G A T C T G A C G T A C G T A A C G T A T C G G T C A A C G T
A C G T T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:7
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-CAGTAAATGA
ACAGGAAGTG-
 A C G T G T A C C G T A C T A G C G A T C T G A C G T A C G T A A C G T A T C G G T C A
T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:8
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--CAGTAAATGA
GGCCATAAATCA
 A C G T A C G T G T A C C G T A C T A G C G A T C T G A C G T A C G T A A C G T A T C G G T C A
C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A

PB0028.1_Hbp1_1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CAGTAAATGA-----
ACTATGAATGAATGAT
 A C G T G T A C C G T A C T A G C G A T C T G A C G T A C G T A A C G T A T C G G T C A A C G T A C G T A C G T A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

Hoxa9/MA0594.1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CAGTAAATGA
GCCATAAATCA
 A C G T G T A C C G T A C T A G C G A T C T G A C G T A C G T A A C G T A T C G G T C A
T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A