Information for 3-GGGCCGAGGGGTAGAG (Motif 6)

C T A G A C T G A C T G A G T C G T A C A C T G C T G A C T A G A C T G A C T G A C T G C G A T T C G A A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A C G T C G T A A G T C G T A C A G T C A G T C A G C T A G T C A C T G A C T G A G T C A G T C A G T C
p-value:1e-10
log p-value:-2.467e+01
Information Content per bp:1.867
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.2 +/- 19.8bp
Average Position of motif in Background89.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PLAG1/MA0163.1/Jaspar

Match Rank:1
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GGGCCGAGGGGTAGAG
GGGGCCCAAGGGGG---
 A C G T C T A G A C T G A C T G A G T C G T A C A C T G C T G A C T A G A C T G A C T G A C T G C G A T T C G A A C T G C G T A A C T G
A C T G C T A G A C T G A C T G A T G C A G T C G T A C C G T A T G C A C A T G A C T G A C T G A C T G C T A G A C G T A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:2
Score:0.51
Offset:4
Orientation:forward strand
Alignment:GGGCCGAGGGGTAGAG
----GGAGGGGGAA--
 C T A G A C T G A C T G A G T C G T A C A C T G C T G A C T A G A C T G A C T G A C T G C G A T T C G A A C T G C G T A A C T G
A C G T A C G T A C G T A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A A C G T A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:3
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-GGGCCGAGGGGTAGAG
GTGGGGGAGGGG-----
 A C G T C T A G A C T G A C T G A G T C G T A C A C T G C T G A C T A G A C T G A C T G A C T G C G A T T C G A A C T G C G T A A C T G
C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G A C G T A C G T A C G T A C G T A C G T

PB0117.1_Eomes_2/Jaspar

Match Rank:4
Score:0.50
Offset:2
Orientation:forward strand
Alignment:GGGCCGAGGGGTAGAG--
--GCGGAGGTGTCGCCTC
 C T A G A C T G A C T G A G T C G T A C A C T G C T G A C T A G A C T G A C T G A C T G C G A T T C G A A C T G C G T A A C T G A C G T A C G T
A C G T A C G T T A C G A T C G T C A G C T A G C T G A T A C G A T C G A G C T T C A G C G A T G A T C A C T G T A G C A G T C A G C T T A G C

PB0202.1_Zfp410_2/Jaspar

Match Rank:5
Score:0.50
Offset:-6
Orientation:reverse strand
Alignment:------GGGCCGAGGGGTAGAG
NNTNNGGGGCGGNGNGN-----
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G A C T G A G T C G T A C A C T G C T G A C T A G A C T G A C T G A C T G C G A T T C G A A C T G C G T A A C T G
C G T A C T G A C A G T C G A T G C A T T A C G A C T G T A C G A C T G T G A C T C A G C T A G C T A G C T A G C A G T C T A G T C G A A C G T A C G T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:6
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GGGCCGAGGGGTAGAG
CAGGCCNNGGCCNN---
 A C G T C T A G A C T G A C T G A G T C G T A C A C T G C T G A C T A G A C T G A C T G A C T G C G A T T C G A A C T G C G T A A C T G
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C A C G T A C G T A C G T

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:7
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:GGGCCGAGGGGTAGAG
-TGCCCNGGGGCA---
 C T A G A C T G A C T G A G T C G T A C A C T G C T G A C T A G A C T G A C T G A C T G C G A T T C G A A C T G C G T A A C T G
A C G T G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T A C G T A C G T

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.49
Offset:5
Orientation:forward strand
Alignment:GGGCCGAGGGGTAGAG---
-----AGGGGGCGGGGCTG
 C T A G A C T G A C T G A G T C G T A C A C T G C T G A C T A G A C T G A C T G A C T G C G A T T C G A A C T G C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.49
Offset:-2
Orientation:forward strand
Alignment:--GGGCCGAGGGGTAGAG--
SMCAGTCWGAKGGAGGAGGC
 A C G T A C G T C T A G A C T G A C T G A G T C G T A C A C T G C T G A C T A G A C T G A C T G A C T G C G A T T C G A A C T G C G T A A C T G A C G T A C G T
A T C G T G A C A T G C C T G A T C A G G A C T A G T C C G A T T C A G T C G A C A T G C T A G C T A G C G T A C T A G C T A G C T G A C T A G C T A G A T G C

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:10
Score:0.49
Offset:4
Orientation:reverse strand
Alignment:GGGCCGAGGGGTAGAG---
----NNVDGGGYGGGGCYN
 C T A G A C T G A C T G A G T C G T A C A C T G C T G A C T A G A C T G A C T G A C T G C G A T T C G A A C T G C G T A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T A C G T G A C T C A G C T G A A C T G A C T G A C T G A G C T A C T G A C T G C T A G A C T G A G T C A G T C C T G A