Information for 2-TGGGACAGCGGCGCTG (Motif 5)

A C G T C T A G A C T G A C T G C G T A A T G C C G T A A C T G T A G C C T A G A C T G T A G C A C T G A G T C A G C T A C T G
Reverse Opposite:
A G T C C T G A A C T G A G T C A C T G A G T C A G T C A C T G A G T C A C G T A T C G A C G T A G T C A G T C A G T C G T C A
p-value:1e-10
log p-value:-2.467e+01
Information Content per bp:1.842
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.5 +/- 21.0bp
Average Position of motif in Background40.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TGGGACAGCGGCGCTG
CCAGGAACAG--------
 A C G T A C G T A C G T C T A G A C T G A C T G C G T A A T G C C G T A A C T G T A G C C T A G A C T G T A G C A C T G A G T C A G C T A C T G
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:2
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGGGACAGCGGCGCTG
NGNGACAGCTGCN---
 A C G T C T A G A C T G A C T G C G T A A T G C C G T A A C T G T A G C C T A G A C T G T A G C A C T G A G T C A G C T A C T G
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:3
Score:0.54
Offset:0
Orientation:forward strand
Alignment:TGGGACAGCGGCGCTG
AGCAACAGCCGCACC-
 A C G T C T A G A C T G A C T G C G T A A T G C C G T A A C T G T A G C C T A G A C T G T A G C A C T G A G T C A G C T A C T G
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:4
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGGGACAGCGGCGCTG
NNAGGGACAAGGGCNC--
 A C G T A C G T A C G T C T A G A C T G A C T G C G T A A T G C C G T A A C T G T A G C C T A G A C T G T A G C A C T G A G T C A G C T A C T G
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:TGGGACAGCGGCGCTG
---GACAGCTGCAG--
 A C G T C T A G A C T G A C T G C G T A A T G C C G T A A C T G T A G C C T A G A C T G T A G C A C T G A G T C A G C T A C T G
A C G T A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T A C G T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:6
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TGGGACAGCGGCGCTG
GTGGGGGAGGGG-----
 A C G T A C G T C T A G A C T G A C T G C G T A A T G C C G T A A C T G T A G C C T A G A C T G T A G C A C T G A G T C A G C T A C T G
C T A G G C A T A C T G A C T G C T A G A C T G A C T G G C T A C A T G A C T G C A T G A T C G A C G T A C G T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TGGGACAGCGGCGCTG
---AACAGCTGCAG--
 A C G T C T A G A C T G A C T G C G T A A T G C C G T A A C T G T A G C C T A G A C T G T A G C A C T G A G T C A G C T A C T G
A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TGGGACAGCGGCGCTG
TGGAACAGMA------
 A C G T C T A G A C T G A C T G C G T A A T G C C G T A A C T G T A G C C T A G A C T G T A G C A C T G A G T C A G C T A C T G
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:TGGGACAGCGGCGCTG
---CACAGN-------
 A C G T C T A G A C T G A C T G C G T A A T G C C G T A A C T G T A G C C T A G A C T G T A G C A C T G A G T C A G C T A C T G
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:10
Score:0.51
Offset:3
Orientation:forward strand
Alignment:TGGGACAGCGGCGCTG
---AACAGCTG-----
 A C G T C T A G A C T G A C T G C G T A A T G C C G T A A C T G T A G C C T A G A C T G T A G C A C T G A G T C A G C T A C T G
A C G T A C G T A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T A C G T A C G T A C G T A C G T