Information for 8-CAAGGCCAGAGACAGG (Motif 16)

A G T C C G T A C T G A A C T G C T A G A G T C G A T C C G T A A T C G C G T A A C T G T C G A A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G A C G T A G T C A C G T A T G C A C G T C A T G A C T G A G T C A G T C A G C T A C G T A C T G
p-value:1e-10
log p-value:-2.507e+01
Information Content per bp:1.878
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets43.4 +/- 29.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CAAGGCCAGAGACAGG
CAAGGHCANV------
 A G T C C G T A C T G A A C T G C T A G A G T C G A T C C G T A A T C G C G T A A C T G T C G A A G T C C G T A A C T G A C T G
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:2
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CAAGGCCAGAGACAGG
NTCAAGGTCA--------
 A C G T A C G T A G T C C G T A C T G A A C T G C T A G A G T C G A T C C G T A A T C G C G T A A C T G T C G A A G T C C G T A A C T G A C T G
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAAGGCCAGAGACAGG
BTCAAGGTCA--------
 A C G T A C G T A G T C C G T A C T G A A C T G C T A G A G T C G A T C C G T A A T C G C G T A A C T G T C G A A G T C C G T A A C T G A C T G
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:4
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CAAGGCCAGAGACAGG
AAGTTCAAGGTCAGC------
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C T G A A C T G C T A G A G T C G A T C C G T A A T C G C G T A A C T G T C G A A G T C C G T A A C T G A C T G
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:5
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CAAGGCCAGAGACAGG
--AGGTGNCAGACAG-
 A G T C C G T A C T G A A C T G C T A G A G T C G A T C C G T A A T C G C G T A A C T G T C G A A G T C C G T A A C T G A C T G
A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G A C G T

REST/MA0138.2/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CAAGGCCAGAGACAGG---
TTCAGCACCATGGACAGCGCC
 A C G T A C G T A G T C C G T A C T G A A C T G C T A G A G T C G A T C C G T A A T C G C G T A A C T G T C G A A G T C C G T A A C T G A C T G A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:7
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CAAGGCCAGAGACAGG---
TCAGCACCATGGACAGCTCC
 A C G T A G T C C G T A C T G A A C T G C T A G A G T C G A T C C G T A A T C G C G T A A C T G T C G A A G T C C G T A A C T G A C T G A C G T A C G T A C G T
A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CAAGGCCAGAGACAGG
TCAAGGTCAN-------
 A C G T A G T C C G T A C T G A A C T G C T A G A G T C G A T C C G T A A T C G C G T A A C T G T C G A A G T C C G T A A C T G A C T G
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:9
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CAAGGCCAGAGACAGG----
--RGGTCADNNAGAGGTCAV
 A G T C C G T A C T G A A C T G C T A G A G T C G A T C C G T A A T C G C G T A A C T G T C G A A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T C T G A C A T G A C T G A C G T A T G C C G T A C A T G T A C G A T G C G C T A T A C G C T G A C T A G A C T G A C G T A T G C C G T A T A G C

ESRRB/MA0141.3/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CAAGGCCAGAGACAGG
TCAAGGTCATA------
 A C G T A G T C C G T A C T G A A C T G C T A G A G T C G A T C C G T A A T C G C G T A A C T G T C G A A G T C C G T A A C T G A C T G
G A C T T A G C G C T A T C G A T C A G A T C G A G C T G A T C C T G A G C A T G C T A A C G T A C G T A C G T A C G T A C G T A C G T