Information for 6-ATSAWGAGACAAT (Motif 11)

C G T A A G C T A T G C C G T A C G T A A C T G C G T A A T C G C T G A A G T C G T C A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C T G A G C T A T G C A C G T A G T C C G A T A C G T A T C G C T G A A C G T
p-value:1e-11
log p-value:-2.678e+01
Information Content per bp:1.910
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.73%
Number of Background Sequences with motif2.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.3 +/- 13.5bp
Average Position of motif in Background39.7 +/- 15.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox17/MA0078.1/Jaspar

Match Rank:1
Score:0.68
Offset:7
Orientation:reverse strand
Alignment:ATSAWGAGACAAT---
-------GACAATGNN
 C G T A A G C T A T G C C G T A C G T A A C T G C G T A A T C G C T G A A G T C G T C A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G

PB0183.1_Sry_2/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:ATSAWGAGACAAT-----
-TCACGGAACAATAGGTG
 C G T A A G C T A T G C C G T A C G T A A C T G C G T A A T C G C T G A A G T C G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

PB0168.1_Sox14_2/Jaspar

Match Rank:3
Score:0.64
Offset:3
Orientation:forward strand
Alignment:ATSAWGAGACAAT-----
---CTCACACAATGGCGC
 C G T A A G C T A T G C C G T A C G T A A C T G C G T A A T C G C T G A A G T C G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

Sox6/MA0515.1/Jaspar

Match Rank:4
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:ATSAWGAGACAAT--
-----AAAACAATGG
 C G T A A G C T A T G C C G T A C G T A A C T G C G T A A T C G C T G A A G T C G T C A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:5
Score:0.62
Offset:6
Orientation:forward strand
Alignment:ATSAWGAGACAAT---
------RAACAATGGN
 C G T A A G C T A T G C C G T A C G T A A C T G C G T A A T C G C T G A A G T C G T C A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:6
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:ATSAWGAGACAAT--
-----RNAACAATGG
 C G T A A G C T A T G C C G T A C G T A A C T G C G T A A T C G C T G A A G T C G T C A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G

PB0073.1_Sox7_1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:forward strand
Alignment:ATSAWGAGACAAT---------
AATAAAGAACAATAGAATTTCA
 C G T A A G C T A T G C C G T A C G T A A C T G C G T A A T C G C T G A A G T C G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T C A G C T A A C G T C T G A G C T A C G T A C T A G C T G A C G T A A G T C C G T A C T G A C G A T C G T A T C A G G C T A G C T A G A C T G C A T G C A T A G T C G C T A

PB0070.1_Sox30_1/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:forward strand
Alignment:ATSAWGAGACAAT------
---AATGAACAATGGAATT
 C G T A A G C T A T G C C G T A C G T A A C T G C G T A A T C G C T G A A G T C G T C A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

SRY/MA0084.1/Jaspar

Match Rank:9
Score:0.60
Offset:4
Orientation:forward strand
Alignment:ATSAWGAGACAAT
----GTAAACAAT
 C G T A A G C T A T G C C G T A C G T A A C T G C G T A A T C G C T G A A G T C G T C A C G T A A C G T
A C G T A C G T A C G T A C G T A C T G C G A T C G T A C G T A C G T A A G T C C G T A C T G A C G A T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:ATSAWGAGACAAT--
-----VRAACAATGG
 C G T A A G C T A T G C C G T A C G T A A C T G C G T A A T C G C T G A A G T C G T C A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G