Information for 6-CCATSCAGTGTGT (Motif 5)

A T G C A G T C C T G A A C G T A T C G A G T C C G T A A C T G A C G T A C T G A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C G T C A G T A C G T C A A G T C A C G T C T A G A T G C C G T A A G C T A C T G A T C G
p-value:1e-12
log p-value:-2.988e+01
Information Content per bp:1.837
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.91%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets32.6 +/- 14.1bp
Average Position of motif in Background64.6 +/- 16.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CCATSCAGTGTGT--
NNNANTGCAGTGCNNTT
 A C G T A C G T A T G C A G T C C T G A A C G T A T C G A G T C C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CCATSCAGTGTGT------
---NNGCGTGTGTGCNGCN
 A T G C A G T C C T G A A C G T A T C G A G T C C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

PB0206.1_Zic2_2/Jaspar

Match Rank:3
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CCATSCAGTGTGT
TCNCCTGCTGNGNNN
 A C G T A C G T A T G C A G T C C T G A A C G T A T C G A G T C C G T A A C T G A C G T A C T G A C G T A C T G A C G T
G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PB0168.1_Sox14_2/Jaspar

Match Rank:4
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CCATSCAGTGTGT---
-NNNCCATTGTGTNAN
 A T G C A G T C C T G A A C G T A T C G A G T C C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

PB0205.1_Zic1_2/Jaspar

Match Rank:5
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CCATSCAGTGTGT
TNTCCTGCTGTGNNG
 A C G T A C G T A T G C A G T C C T G A A C G T A T C G A G T C C G T A A C T G A C G T A C T G A C G T A C T G A C G T
G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G

POL007.1_BREd/Jaspar

Match Rank:6
Score:0.52
Offset:7
Orientation:forward strand
Alignment:CCATSCAGTGTGT-
-------GTTTGTT
 A T G C A G T C C T G A A C G T A T C G A G T C C G T A A C T G A C G T A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T C A G T A C G T A C T G A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CCATSCAGTGTGT
--NTCAAGTGG--
 A T G C A G T C C T G A A C G T A T C G A G T C C G T A A C T G A C G T A C T G A C G T A C T G A C G T
A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CCATSCAGTGTGT
-CCTGCTGAGH--
 A T G C A G T C C T G A A C G T A T C G A G T C C G T A A C T G A C G T A C T G A C G T A C T G A C G T
A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:9
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CCATSCAGTGTGT
CCCCCTGCTGTG---
 A C G T A C G T A T G C A G T C C T G A A C G T A T C G A G T C C G T A A C T G A C G T A C T G A C G T A C T G A C G T
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:reverse strand
Alignment:--CCATSCAGTGTGT
NNTCCTGCTGTGNNN
 A C G T A C G T A T G C A G T C C T G A A C G T A T C G A G T C C G T A A C T G A C G T A C T G A C G T A C T G A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C