Information for 6-AGGCGGATTT (Motif 12)

T C G A T C A G A T C G A T G C C T A G A T C G C G T A A C G T A G C T C G A T
Reverse Opposite:
G C T A T C G A T G C A G C A T T A G C G A T C T A C G T A G C A G T C A G C T
p-value:1e-11
log p-value:-2.626e+01
Information Content per bp:1.657
Number of Target Sequences with motif51.0
Percentage of Target Sequences with motif5.93%
Number of Background Sequences with motif907.9
Percentage of Background Sequences with motif1.92%
Average Position of motif in Targets51.0 +/- 27.2bp
Average Position of motif in Background47.9 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF/MA0686.1/Jaspar

Match Rank:1
Score:0.65
Offset:0
Orientation:forward strand
Alignment:AGGCGGATTT-
ACCCGGATGTA
 T C G A T C A G A T C G A T G C C T A G A T C G C G T A A C G T A G C T C G A T A C G T
C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A

PH0126.1_Obox6/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--AGGCGGATTT---
AAAAACGGATTATTG
 A C G T A C G T T C G A T C A G A T C G A T G C C T A G A T C G C G T A A C G T A G C T C G A T A C G T A C G T A C G T
G T C A G C T A C T G A G C T A C T A G T A G C C T A G A C T G G T C A A C G T G A C T C G T A C G A T G A C T A T C G

PH0122.1_Obox2/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AGGCGGATTT-----
TGAGGGGGATTAACTAT
 A C G T A C G T T C G A T C A G A T C G A T G C C T A G A T C G C G T A A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T
C G A T A C T G T C G A C T A G C T A G C T A G C T A G C A T G G T C A C A G T G C A T C G T A C G T A G T A C C G A T G T C A G A C T

PH0139.1_Pitx3/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGGCGGATTT------
AGGGGGATTAGCTGCC
 T C G A T C A G A T C G A T G C C T A G A T C G C G T A A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T
T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

PH0121.1_Obox1/Jaspar

Match Rank:5
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AGGCGGATTT-----
TTAAGGGGATTAACTAC
 A C G T A C G T T C G A T C A G A T C G A T G C C T A G A T C G C G T A A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T
C A G T C G A T T C G A T C G A C T A G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C G T A G T A C C G A T G C T A A G T C

Crx/MA0467.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AGGCGGATTT-
AAGAGGATTAG
 T C G A T C A G A T C G A T G C C T A G A T C G C G T A A C G T A G C T C G A T A C G T
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

PH0123.1_Obox3/Jaspar

Match Rank:7
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGGCGGATTT-----
TGAGGGGGATTAACTAT
 A C G T A C G T T C G A T C A G A T C G A T G C C T A G A T C G C G T A A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T

Dmbx1/MA0883.1/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGGCGGATTT-----
TGAACCGGATTAATGAA
 A C G T A C G T T C G A T C A G A T C G A T G C C T A G A T C G C G T A A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

PH0025.1_Dmbx1/Jaspar

Match Rank:9
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGGCGGATTT-----
TGAACCGGATTAATGAA
 A C G T A C G T T C G A T C A G A T C G A T G C C T A G A T C G C G T A A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T
G C A T C T A G C T G A C G T A G T A C T G A C T C A G A T C G G T C A A C G T G A C T C G T A C T G A A C G T A T C G G C A T C G T A

ETV5/MA0765.1/Jaspar

Match Rank:10
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AGGCGGATTT-
-ACCGGAAGTG
 T C G A T C A G A T C G A T G C C T A G A T C G C G T A A C G T A G C T C G A T A C G T
A C G T C T G A T A G C T G A C A C T G A C T G G C T A G C T A T C A G A G C T C T A G