Information for 4-GCAGCCAATCAGC (Motif 6)

A T C G A G T C G T C A A T C G A G T C A G T C C G T A G T C A A C G T A T G C C G T A A C T G T G A C
Reverse Opposite:
A C T G G T A C A C G T A T C G C G T A A C G T C G A T C T A G A C T G T A G C A C G T A C T G T A G C
p-value:1e-12
log p-value:-2.772e+01
Information Content per bp:1.803
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.73%
Number of Background Sequences with motif60.3
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets60.5 +/- 22.9bp
Average Position of motif in Background51.4 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.79
Offset:2
Orientation:forward strand
Alignment:GCAGCCAATCAGC
--AGCCAATCGG-
 A T C G A G T C G T C A A T C G A G T C A G T C C G T A G T C A A C G T A T G C C G T A A C T G T G A C
A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---GCAGCCAATCAGC
AAATGGACCAATCAG-
 A C G T A C G T A C G T A T C G A G T C G T C A A T C G A G T C A G T C C G T A G T C A A C G T A T G C C G T A A C T G T G A C
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.75
Offset:-1
Orientation:forward strand
Alignment:-GCAGCCAATCAGC
ACTAGCCAATCA--
 A C G T A T C G A G T C G T C A A T C G A G T C A G T C C G T A G T C A A C G T A T G C C G T A A C T G T G A C
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T A C G T

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GCAGCCAATCAGC-----
TGGACCAATCAGCACTCT
 A T C G A G T C G T C A A T C G A G T C A G T C C G T A G T C A A C G T A T G C C G T A A C T G T G A C A C G T A C G T A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.69
Offset:4
Orientation:forward strand
Alignment:GCAGCCAATCAGC
----CCAATCAA-
 A T C G A G T C G T C A A T C G A G T C A G T C C G T A G T C A A C G T A T G C C G T A A C T G T G A C
A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:6
Score:0.69
Offset:0
Orientation:forward strand
Alignment:GCAGCCAATCAGC----
CGACCCAATCAACGGTG
 A T C G A G T C G T C A A T C G A G T C A G T C C G T A G T C A A C G T A T G C C G T A A C T G T G A C A C G T A C G T A C G T A C G T
A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

Gfi1/MA0038.1/Jaspar

Match Rank:7
Score:0.62
Offset:4
Orientation:forward strand
Alignment:GCAGCCAATCAGC-
----CAAATCACTG
 A T C G A G T C G T C A A T C G A G T C A G T C C G T A G T C A A C G T A T G C C G T A A C T G T G A C A C G T
A C G T A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

PH0098.1_Lhx8/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCAGCCAATCAGC----
ACCCCTAATTAGCGGTG
 A T C G A G T C G T C A A T C G A G T C A G T C C G T A G T C A A C G T A T G C C G T A A C T G T G A C A C G T A C G T A C G T A C G T
G C T A T G A C T G A C T G A C T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A G T C C A T G C A T G A C G T C T A G

DUXA/MA0884.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCAGCCAATCAGC
CTAATTTAATCAA-
 A C G T A T C G A G T C G T C A A T C G A G T C A G T C C G T A G T C A A C G T A T G C C G T A A C T G T G A C
G A T C G A C T C T G A T C G A G A C T A G C T A G C T T G C A C T G A A C G T A G T C C G T A C T G A A C G T

DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer

Match Rank:10
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GCAGCCAATCAGC
NWTAAYCYAATCAWN
 A C G T A C G T A T C G A G T C G T C A A T C G A G T C A G T C C G T A G T C A A C G T A T G C C G T A A C T G T G A C
C A T G G C A T C G A T C G T A C G T A G A T C A G T C A G C T C G T A C G T A A C G T A G T C C G T A C G T A G C A T