Information for 2-AAABCAGCCCCGTGTG (Motif 4)

C G T A T C G A C T G A A T G C G T A C C G T A A C T G A T G C G A T C A T G C G A T C C T A G A C G T A T C G A C G T C A T G
Reverse Opposite:
G T A C T G C A T A G C T G C A A G T C C T A G T A C G C T A G A T C G G T A C A C G T A C T G T A C G A G C T A G C T G A C T
p-value:1e-13
log p-value:-3.151e+01
Information Content per bp:1.682
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.04%
Number of Background Sequences with motif7.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.1 +/- 25.7bp
Average Position of motif in Background37.3 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.57
Offset:4
Orientation:forward strand
Alignment:AAABCAGCCCCGTGTG
----CAGCC-------
 C G T A T C G A C T G A A T G C G T A C C G T A A C T G A T G C G A T C A T G C G A T C C T A G A C G T A T C G A C G T C A T G
A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:2
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:AAABCAGCCCCGTGTG
--CGCAGCTGCG----
 C G T A T C G A C T G A A T G C G T A C C G T A A C T G A T G C G A T C A T G C G A T C C T A G A C G T A T C G A C G T C A T G
A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T

PAX5/MA0014.2/Jaspar

Match Rank:3
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-AAABCAGCCCCGTGTG--
GAGGGCAGCCAAGCGTGAC
 A C G T C G T A T C G A C T G A A T G C G T A C C G T A A C T G A T G C G A T C A T G C G A T C C T A G A C G T A T C G A C G T C A T G A C G T A C G T
T C A G C G T A T C A G C T A G A C T G G A T C C T G A T A C G A G T C T A G C T C G A C T G A A T C G A G T C C T A G C A G T C T A G C T G A G T A C

POL002.1_INR/Jaspar

Match Rank:4
Score:0.52
Offset:3
Orientation:forward strand
Alignment:AAABCAGCCCCGTGTG
---TCAGTCTT-----
 C G T A T C G A C T G A A T G C G T A C C G T A A C T G A T G C G A T C A T G C G A T C C T A G A C G T A T C G A C G T C A T G
A C G T A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T A C G T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:5
Score:0.51
Offset:-6
Orientation:forward strand
Alignment:------AAABCAGCCCCGTGTG
AAGGCGAAATCATCGCA-----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A T C G A C T G A A T G C G T A C C G T A A C T G A T G C G A T C A T G C G A T C C T A G A C G T A T C G A C G T C A T G
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A A C G T A C G T A C G T A C G T A C G T

Creb3l2/MA0608.1/Jaspar

Match Rank:6
Score:0.51
Offset:6
Orientation:forward strand
Alignment:AAABCAGCCCCGTGTG
------GCCACGTGT-
 C G T A T C G A C T G A A T G C G T A C C G T A A C T G A T G C G A T C A T G C G A T C C T A G A C G T A T C G A C G T C A T G
A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C A T G C C G T A A G T C A C T G A C G T A T C G C A G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:AAABCAGCCCCGTGTG
-CAGCAGCTGN-----
 C G T A T C G A C T G A A T G C G T A C C G T A A C T G A T G C G A T C A T G C G A T C C T A G A C G T A T C G A C G T C A T G
A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:8
Score:0.51
Offset:2
Orientation:forward strand
Alignment:AAABCAGCCCCGTGTG
--AGCAGCTGCT----
 C G T A T C G A C T G A A T G C G T A C C G T A A C T G A T G C G A T C A T G C G A T C C T A G A C G T A T C G A C G T C A T G
A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:9
Score:0.50
Offset:1
Orientation:forward strand
Alignment:AAABCAGCCCCGTGTG
-NAHCAGCTGD-----
 C G T A T C G A C T G A A T G C G T A C C G T A A C T G A T G C G A T C A T G C G A T C C T A G A C G T A T C G A C G T C A T G
A C G T G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T A C G T A C G T

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.50
Offset:6
Orientation:forward strand
Alignment:AAABCAGCCCCGTGTG
------GCTCCG----
 C G T A T C G A C T G A A T G C G T A C C G T A A C T G A T G C G A T C A T G C G A T C C T A G A C G T A T C G A C G T C A T G
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T