Information for 10-TYTATTTRAG (Motif 31)

A C G T G A C T A C G T C G T A C G A T G C A T C A G T T C A G T G C A A C T G
Reverse Opposite:
T G A C A C G T A G T C G T C A C G T A C G T A G C A T C G T A C T G A G T C A
p-value:1e-5
log p-value:-1.245e+01
Information Content per bp:1.674
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.30%
Number of Background Sequences with motif326.8
Percentage of Background Sequences with motif0.68%
Average Position of motif in Targets50.5 +/- 27.5bp
Average Position of motif in Background50.0 +/- 28.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXA13/MA0650.1/Jaspar

Match Rank:1
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TYTATTTRAG
TTTTTATTGG--
 A C G T A C G T A C G T G A C T A C G T C G T A C G A T G C A T C A G T T C A G T G C A A C T G
C A G T A C G T A C G T C G A T C G A T C G T A C G A T C A G T T C A G A T C G A C G T A C G T

HOXB13/MA0901.1/Jaspar

Match Rank:2
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TYTATTTRAG
NTTTTATTGG--
 A C G T A C G T A C G T G A C T A C G T C G T A C G A T G C A T C A G T T C A G T G C A A C T G
C A T G C A G T C A G T C G A T G C A T C T G A G C A T C A G T C T A G A T C G A C G T A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:3
Score:0.68
Offset:-5
Orientation:reverse strand
Alignment:-----TYTATTTRAG-
NNANTTTTATTGGNNN
 A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C G T C G T A C G A T G C A T C A G T T C A G T G C A A C T G A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

HOXD13/MA0909.1/Jaspar

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TYTATTTRAG
NTTTTATTGG--
 A C G T A C G T A C G T G A C T A C G T C G T A C G A T G C A T C A G T T C A G T G C A A C T G
C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-TYTATTTRAG
TTTTATTRGN-
 A C G T A C G T G A C T A C G T C G T A C G A T G C A T C A G T T C A G T G C A A C T G
C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A A C G T

CDX1/MA0878.1/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TYTATTTRAG
TTTTATTGC--
 A C G T A C G T G A C T A C G T C G T A C G A T G C A T C A G T T C A G T G C A A C T G
C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:7
Score:0.65
Offset:-8
Orientation:reverse strand
Alignment:--------TYTATTTRAG
NNNNNNCTTTTATAN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C G T C G T A C G A T G C A T C A G T T C A G T G C A A C T G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T

TBP/MA0108.2/Jaspar

Match Rank:8
Score:0.65
Offset:-8
Orientation:reverse strand
Alignment:--------TYTATTTRAG
NNNNNNCTTTTATAN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C G T C G T A C G A T G C A T C A G T T C A G T G C A A C T G
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T

PB0080.1_Tbp_1/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TYTATTTRAG--
NANTTATATATAANGN
 A C G T A C G T A C G T A C G T A C G T G A C T A C G T C G T A C G A T G C A T C A G T T C A G T G C A A C T G A C G T A C G T
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TYTATTTRAG
TTTTATKRGG-
 A C G T A C G T G A C T A C G T C G T A C G A T G C A T C A G T T C A G T G C A A C T G
C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G A C G T