Information for 7-GAAGAGGCTCCTC (Motif 11)

A T C G C T G A C T G A T C A G C T G A A C T G A C T G T A G C A G C T A G T C G T A C A C G T A G T C
Reverse Opposite:
T A C G C G T A A C T G C T A G C T G A A T C G A G T C A G T C G A C T A G T C A G C T A G C T A T G C
p-value:1e-10
log p-value:-2.508e+01
Information Content per bp:1.783
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.61%
Number of Background Sequences with motif60.7
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets31.8 +/- 20.6bp
Average Position of motif in Background53.3 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0203.1_Zfp691_2/Jaspar

Match Rank:1
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GAAGAGGCTCCTC----
TACGAGACTCCTCTAAC
 A T C G C T G A C T G A T C A G C T G A A C T G A C T G T A G C A G C T A G T C G T A C A C G T A G T C A C G T A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:2
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:GAAGAGGCTCCTC----
--AGATGCTRCTRCCHT
 A T C G C T G A C T G A T C A G C T G A A C T G A C T G T A G C A G C T A G T C G T A C A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GAAGAGGCTCCTC
NGAAGC--------
 A C G T A T C G C T G A C T G A T C A G C T G A A C T G A C T G T A G C A G C T A G T C G T A C A C G T A G T C
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GAAGAGGCTCCTC-
AGAAATGACTTCCCT
 A C G T A T C G C T G A C T G A T C A G C T G A A C T G A C T G T A G C A G C T A G T C G T A C A C G T A G T C A C G T
C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.53
Offset:6
Orientation:forward strand
Alignment:GAAGAGGCTCCTC
------GCTCCG-
 A T C G C T G A C T G A T C A G C T G A A C T G A C T G T A G C A G C T A G T C G T A C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:6
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----GAAGAGGCTCCTC
AANTTCAAGTGGCTTN--
 A C G T A C G T A C G T A C G T A C G T A T C G C T G A C T G A T C A G C T G A A C T G A C T G T A G C A G C T A G T C G T A C A C G T A G T C
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A A C G T A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:7
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----GAAGAGGCTCCTC
AATTTCAAGTGGCTTN--
 A C G T A C G T A C G T A C G T A C G T A T C G C T G A C T G A T C A G C T G A A C T G A C T G T A G C A G C T A G T C G T A C A C G T A G T C
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GAAGAGGCTCCTC
-----NGCTN---
 A T C G C T G A C T G A T C A G C T G A A C T G A C T G T A G C A G C T A G T C G T A C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:9
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----GAAGAGGCTCCTC
AATNTTAAGTGGNTNN--
 A C G T A C G T A C G T A C G T A C G T A T C G C T G A C T G A T C A G C T G A A C T G A C T G T A G C A G C T A G T C G T A C A C G T A G T C
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A A C G T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:10
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----GAAGAGGCTCCTC
AAATTCAAGTGGNTTN--
 A C G T A C G T A C G T A C G T A C G T A T C G C T G A C T G A T C A G C T G A A C T G A C T G T A G C A G C T A G T C G T A C A C G T A G T C
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A A C G T A C G T