Information for 10-GCCTCTAGAGGCC (Motif 24)

A C T G A G T C A G T C C G A T A G T C A C G T C G T A A C T G C G T A A C T G A C T G A G T C A G T C
Reverse Opposite:
C T A G A C T G A G T C A G T C C G A T A G T C A C G T C G T A A C T G C G T A A C T G A C T G A G T C
p-value:1e-3
log p-value:-8.773e+00
Information Content per bp:1.924
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.24%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.5 +/- 7.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--GCCTCTAGAGGCC-----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C T G A G T C A G T C C G A T A G T C A C G T C G T A A C T G C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GCCTCTAGAGGCC----
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C T G A G T C A G T C C G A T A G T C A C G T C G T A A C T G C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCCTCTAGAGGCC-------
GCCASCAGGGGGCGCYVNNG
 A C T G A G T C A G T C C G A T A G T C A C G T C G T A A C T G C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:4
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GCCTCTAGAGGCC
NSCACTYVAV---
 A C T G A G T C A G T C C G A T A G T C A C G T C G T A A C T G C G T A A C T G A C T G A G T C A G T C
C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G A C G T A C G T A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GCCTCTAGAGGCC
RSCACTYRAG---
 A C T G A G T C A G T C C G A T A G T C A C G T C G T A A C T G C G T A A C T G A C T G A G T C A G T C
C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.52
Offset:8
Orientation:forward strand
Alignment:GCCTCTAGAGGCC---
--------AGGCCTNG
 A C T G A G T C A G T C C G A T A G T C A C G T C G T A A C T G C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.52
Offset:0
Orientation:forward strand
Alignment:GCCTCTAGAGGCC--
NGNTCTAGAACCNGV
 A C T G A G T C A G T C C G A T A G T C A C G T C G T A A C T G C G T A A C T G A C T G A G T C A G T C A C G T A C G T
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:8
Score:0.51
Offset:8
Orientation:forward strand
Alignment:GCCTCTAGAGGCC---
--------AGGCCTAG
 A C T G A G T C A G T C C G A T A G T C A C G T C G T A A C T G C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:GCCTCTAGAGGCC
---TTGAGTGSTT
 A C T G A G T C A G T C C G A T A G T C A C G T C G T A A C T G C G T A A C T G A C T G A G T C A G T C
A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Zfx/MA0146.2/Jaspar

Match Rank:10
Score:0.50
Offset:7
Orientation:reverse strand
Alignment:GCCTCTAGAGGCC--------
-------CAGGCCNNGGCCNN
 A C T G A G T C A G T C C G A T A G T C A C G T C G T A A C T G C G T A A C T G A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C