Information for 14-ATCCACCTAA (Motif 18)

C G T A A G C T A T G C A G T C C G T A G T A C A G T C C G A T C G T A G T C A
Reverse Opposite:
A C G T G C A T C G T A A C T G C A T G A C G T A C T G A T C G C T G A A C G T
p-value:1e-7
log p-value:-1.786e+01
Information Content per bp:1.779
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.43%
Number of Background Sequences with motif75.6
Percentage of Background Sequences with motif0.16%
Average Position of motif in Targets50.4 +/- 21.5bp
Average Position of motif in Background53.0 +/- 25.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF354C/MA0130.1/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:forward strand
Alignment:ATCCACCTAA
ATCCAC----
 C G T A A G C T A T G C A G T C C G T A G T A C A G T C C G A T C G T A G T C A
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T

HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer

Match Rank:2
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---ATCCACCTAA
GYCATCMATCAT-
 A C G T A C G T A C G T C G T A A G C T A T G C A G T C C G T A G T A C A G T C C G A T C G T A G T C A
T A C G G A C T T G A C C G T A A C G T G A T C G T C A C G T A A C G T A T G C C G T A G A C T A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:3
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--ATCCACCTAA----
TAAGCCACTTAACATT
 A C G T A C G T C G T A A G C T A T G C A G T C C G T A G T A C A G T C C G A T C G T A G T C A A C G T A C G T A C G T A C G T
C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.63
Offset:1
Orientation:forward strand
Alignment:ATCCACCTAA-
-NNCACCTGNN
 C G T A A G C T A T G C A G T C C G T A G T A C A G T C C G A T C G T A G T C A A C G T
A C G T A T G C T G C A A G T C C G T A A G T C A G T C A C G T A C T G A T G C G T C A

PH0114.1_Nkx2-5/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ATCCACCTAA----
TAAGCCACTTGAATTT
 A C G T A C G T C G T A A G C T A T G C A G T C C G T A G T A C A G T C C G A T C G T A G T C A A C G T A C G T A C G T A C G T
G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

TCF4/MA0830.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ATCCACCTAA-
-CGCACCTGCT
 C G T A A G C T A T G C A G T C C G T A G T A C A G T C C G A T C G T A G T C A A C G T
A C G T G A T C T C A G G A T C C G T A A T G C T A G C C G A T C T A G A T G C C G A T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ATCCACCTAA----
CTTAACCACTTAAGGAT
 A C G T A C G T A C G T C G T A A G C T A T G C A G T C C G T A G T A C A G T C C G A T C G T A G T C A A C G T A C G T A C G T A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

ID4/MA0824.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ATCCACCTAA-
-TACACCTGTC
 C G T A A G C T A T G C A G T C C G T A G T A C A G T C C G A T C G T A G T C A A C G T
A C G T C A G T T C G A A G T C C T G A A T G C T A G C C G A T T C A G A G C T G A T C

TCF3/MA0522.2/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ATCCACCTAA-
-AACACCTGCT
 C G T A A G C T A T G C A G T C C G T A G T A C A G T C C G A T C G T A G T C A A C G T
A C G T G T C A T C G A A G T C G C T A A T G C A T G C G C A T T C A G A G T C C A G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---ATCCACCTAA----
CATAACCACTTAACAAC
 A C G T A C G T A C G T C G T A A G C T A T G C A G T C C G T A G T A C A G T C C G A T C G T A G T C A A C G T A C G T A C G T A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C