Information for 13-TTACAAATCA (Motif 17)

A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C G T A T G C C G T A
Reverse Opposite:
A C G T A T C G C G T A A C G T A C G T A C G T A C T G A C G T C G T A C G T A
p-value:1e-8
log p-value:-1.933e+01
Information Content per bp:1.968
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.48%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.5 +/- 32.6bp
Average Position of motif in Background52.6 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1/MA0038.1/Jaspar

Match Rank:1
Score:0.70
Offset:3
Orientation:forward strand
Alignment:TTACAAATCA---
---CAAATCACTG
 A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C G T A T G C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

PH0037.1_Hdx/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TTACAAATCA-----
AAGGCGAAATCATCGCA
 A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C G T A T G C C G T A A C G T A C G T A C G T A C G T A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

PB0187.1_Tcf7_2/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----TTACAAATCA
CCGTATTATAAACAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C G T A T G C C G T A
G T A C A G T C C A T G C G A T G C T A G C A T C A G T C T G A A C G T G C T A G T C A G T C A G A T C G T C A G C T A

Hoxc9/MA0485.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TTACAAATCA-
GGCCATAAATCAC
 A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C G T A T G C C G T A A C G T
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C

Hoxa9/MA0594.1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TTACAAATCA
GCCATAAATCA
 A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C G T A T G C C G T A
T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TTACAAATCA
GGCCATAAATCA
 A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C G T A T G C C G T A
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TTACAAATCA
CGGTTTCAAA---
 A C G T A C G T A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C G T A T G C C G T A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TTACAAATCA-
---CCAATCAA
 A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C G T A T G C C G T A A C G T
A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

PH0134.1_Pbx1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTACAAATCA-------
TCACCCATCAATAAACA
 A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C G T A T G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T A G T C C G T A G A T C G T A C T G A C C T G A C G A T G T A C G T C A G C T A C G A T G T A C G C T A C G A T T G A C T G C A

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTACAAATCA-
WATGCAAATGAG
 A C G T A C G T A C G T C G T A A G T C C G T A C G T A C G T A A C G T A T G C C G T A A C G T
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G