Information for 4-CGTGCACATGTGTGCA (Motif 8)

A G T C A T C G C A G T A C T G A G T C C G T A A G T C G T C A A G C T C T A G A C G T A C T G A C G T A T C G A T G C C G T A
Reverse Opposite:
G A C T A T C G A T G C C G T A A G T C C G T A A G T C C T G A A C G T A C T G C G A T C T A G A G T C G C T A A T G C T C A G
p-value:1e-12
log p-value:-2.959e+01
Information Content per bp:1.782
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.92%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.2 +/- 18.7bp
Average Position of motif in Background53.3 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Twist2/MA0633.1/Jaspar

Match Rank:1
Score:0.66
Offset:4
Orientation:forward strand
Alignment:CGTGCACATGTGTGCA
----ACCATATGTT--
 A G T C A T C G C A G T A C T G A G T C C G T A A G T C G T C A A G C T C T A G A C G T A C T G A C G T A T C G A T G C C G T A
A C G T A C G T A C G T A C G T C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T A C G T A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CGTGCACATGTGTGCA
CAGATGTGCACATACGT---
 A C G T A C G T A C G T A C G T A G T C A T C G C A G T A C T G A G T C C G T A A G T C G T C A A G C T C T A G A C G T A C T G A C G T A T C G A T G C C G T A
G T A C G C T A C A T G C G T A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A A G C T G T C A G T A C C A T G G A C T A C G T A C G T A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CGTGCACATGTGTGCA
TACATGTGCACATAAAA---
 A C G T A C G T A C G T A C G T A G T C A T C G C A G T A C T G A G T C C G T A A G T C G T C A A G C T C T A G A C G T A C T G A C G T A T C G A T G C C G T A
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A A C G T A C G T A C G T

Bhlha15/MA0607.1/Jaspar

Match Rank:4
Score:0.60
Offset:5
Orientation:forward strand
Alignment:CGTGCACATGTGTGCA
-----CCATATGT---
 A G T C A T C G C A G T A C T G A G T C C G T A A G T C G T C A A G C T C T A G A C G T A C T G A C G T A T C G A T G C C G T A
A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CGTGCACATGTGTGCA---
---NNGCGTGTGTGCNGCN
 A G T C A T C G C A G T A C T G A G T C C G T A A G T C G T C A A G C T C T A G A C G T A C T G A C G T A T C G A T G C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

CLOCK/MA0819.1/Jaspar

Match Rank:6
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CGTGCACATGTGTGCA
----AACACGTGTT--
 A G T C A T C G C A G T A C T G A G T C C G T A A G T C G T C A A G C T C T A G A C G T A C T G A C G T A T C G A T G C C G T A
A C G T A C G T A C G T A C G T C T G A T C G A T G A C T C G A A G T C C T A G A G C T A C T G A G C T G A C T A C G T A C G T

NEUROG2/MA0669.1/Jaspar

Match Rank:7
Score:0.57
Offset:4
Orientation:forward strand
Alignment:CGTGCACATGTGTGCA
----AACATATGTC--
 A G T C A T C G C A G T A C T G A G T C C G T A A G T C G T C A A G C T C T A G A C G T A C T G A C G T A T C G A T G C C G T A
A C G T A C G T A C G T A C G T T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C A C G T A C G T

Atoh1/MA0461.2/Jaspar

Match Rank:8
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CGTGCACATGTGTGCA
----ANCATATGTT--
 A G T C A T C G C A G T A C T G A G T C C G T A A G T C G T C A A G C T C T A G A C G T A C T G A C G T A T C G A T G C C G T A
A C G T A C G T A C G T A C G T C T G A T G C A G T A C G C T A A C G T G T C A A G C T A C T G A C G T A G C T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CGTGCACATGTGTGCA---
---NNNNTTGTGTGCTTNN
 A G T C A T C G C A G T A C T G A G T C C G T A A G T C G T C A A G C T C T A G A C G T A C T G A C G T A T C G A T G C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

Myc/MA0147.2/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CGTGCACATGTGTGCA
-AAGCACATGG-----
 A G T C A T C G C A G T A C T G A G T C C G T A A G T C G T C A A G C T C T A G A C G T A C T G A C G T A T C G A T G C C G T A
A C G T T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T