Information for 6-TCTTTGTGGTCAG (Motif 6)

A C G T A G T C C G A T A G C T A G C T A T C G A C G T A C T G C T A G A G C T G T A C C G T A A C T G
Reverse Opposite:
A G T C A C G T C A T G T C G A G A T C A G T C C G T A T A G C C T G A C T G A C G T A A C T G T G C A
p-value:1e-15
log p-value:-3.652e+01
Information Content per bp:1.723
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.14%
Number of Background Sequences with motif60.8
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets58.5 +/- 24.5bp
Average Position of motif in Background48.0 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TCTTTGTGGTCAG
-NNHTGTGGTTWN
 A C G T A G T C C G A T A G C T A G C T A T C G A C G T A C T G C T A G A G C T G T A C C G T A A C T G
A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TCTTTGTGGTCAG
-CTTTGT------
 A C G T A G T C C G A T A G C T A G C T A T C G A C G T A C T G C T A G A G C T G T A C C G T A A C T G
A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.68
Offset:1
Orientation:forward strand
Alignment:TCTTTGTGGTCAG
-GTCTGTGGTTT-
 A C G T A G T C C G A T A G C T A G C T A T C G A C G T A C T G C T A G A G C T G T A C C G T A A C T G
A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TCTTTGTGGTCAG
---CTGTGGTTTN
 A C G T A G T C C G A T A G C T A G C T A T C G A C G T A C T G C T A G A G C T G T A C C G T A A C T G
A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.65
Offset:2
Orientation:forward strand
Alignment:TCTTTGTGGTCAG
--GCTGTGGTTT-
 A C G T A G T C C G A T A G C T A G C T A T C G A C G T A C T G C T A G A G C T G T A C C G T A A C T G
A C G T A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TCTTTGTGGTCAG
CCWTTGTYYB---
 A C G T A G T C C G A T A G C T A G C T A T C G A C G T A C T G C T A G A G C T G T A C C G T A A C T G
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:7
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----TCTTTGTGGTCAG
AGGVNCCTTTGT------
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A G C T A G C T A T C G A C G T A C T G C T A G A G C T G T A C C G T A A C T G
C G T A C T A G T C A G T C A G A G T C A T G C A G T C G C A T A G C T A C G T A T C G C G A T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TCTTTGTGGTCAG
--NNTGTGGTTT-
 A C G T A G T C C G A T A G C T A G C T A T C G A C G T A C T G C T A G A G C T G T A C C G T A A C T G
A C G T A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TCTTTGTGGTCAG
--TTTGCGGTTT-
 A C G T A G T C C G A T A G C T A G C T A T C G A C G T A C T G C T A G A G C T G T A C C G T A A C T G
A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TCTTTGTGGTCAG
YCTTTGTTCC---
 A C G T A G T C C G A T A G C T A G C T A T C G A C G T A C T G C T A G A G C T G T A C C G T A A C T G
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T