Information for 15-TSSCCACGGC (Motif 15)

C A G T A T G C A T G C G A T C G T A C C T G A T G A C T A C G A T C G G T A C
Reverse Opposite:
A C T G T A G C A T G C A C T G G A C T C A T G C T A G T A C G T A C G G T C A
p-value:1e-8
log p-value:-2.050e+01
Information Content per bp:1.544
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.14%
Number of Background Sequences with motif160.1
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets45.3 +/- 28.5bp
Average Position of motif in Background52.9 +/- 27.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TSSCCACGGC
HTTTCCCASG--
 A C G T A C G T C A G T A T G C A T G C G A T C G T A C C T G A T G A C T A C G A T C G G T A C
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--TSSCCACGGC--
NGTTGCCATGGCAA
 A C G T A C G T C A G T A T G C A T G C G A T C G T A C C T G A T G A C T A C G A T C G G T A C A C G T A C G T
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

MTF1/MA0863.1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--TSSCCACGGC--
TTTGCACACGGCAC
 A C G T A C G T C A G T A T G C A T G C G A T C G T A C C T G A T G A C T A C G A T C G G T A C A C G T A C G T
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C

PB0044.1_Mtf1_1/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----TSSCCACGGC--
NNTTTGCACACGGCCC
 A C G T A C G T A C G T A C G T C A G T A T G C A T G C G A T C G T A C C T G A T G A C T A C G A T C G G T A C A C G T A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TSSCCACGGC----
GTTGCCATGGCAACM
 A C G T C A G T A T G C A T G C G A T C G T A C C T G A T G A C T A C G A T C G G T A C A C G T A C G T A C G T A C G T
C T A G A G C T G A C T C A T G A G T C A G T C G T C A C A G T C T A G T C A G G T A C C T G A T C G A G A T C T G A C

MZF1/MA0056.1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TSSCCACGGC
TCCCCA----
 C A G T A T G C A T G C G A T C G T A C C T G A T G A C T A C G A T C G G T A C
A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T

RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TSSCCACGGC---
CGGTTGCCATGGCAAC
 A C G T A C G T A C G T C A G T A T G C A T G C G A T C G T A C C T G A T G A C T A C G A T C G G T A C A C G T A C G T A C G T
A G T C A T C G C T A G A G C T G A C T C T A G A G T C A G T C G C T A C A G T T C A G T C A G G A T C C T G A T C G A G A T C

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TSSCCACGGC--
GGTTGCCATGGCAA
 A C G T A C G T C A G T A T G C A T G C G A T C G T A C C T G A T G A C T A C G A T C G G T A C A C G T A C G T
C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

Rfx1/MA0509.1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TSSCCACGGC---
GTTGCCATGGNAAC
 A C G T C A G T A T G C A T G C G A T C G T A C C T G A T G A C T A C G A T C G G T A C A C G T A C G T A C G T
A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TSSCCACGGC
ATGCCCACC--
 A C G T C A G T A T G C A T G C G A T C G T A C C T G A T G A C T A C G A T C G G T A C
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T