Information for 8-GCCAGAGGVAGCTGGV (Motif 12)

A C T G A G T C A G T C C G T A A C T G C G T A A T C G C T A G T C G A G T C A C T A G A G T C A G C T C T A G C T A G T C G A
Reverse Opposite:
A C G T A G T C A G T C C T G A A C T G A G T C A C G T A G C T A G T C A T G C C G A T A G T C C G A T A C T G A C T G A G T C
p-value:1e-10
log p-value:-2.427e+01
Information Content per bp:1.777
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets43.6 +/- 15.8bp
Average Position of motif in Background52.1 +/- 20.4bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCCAGAGGVAGCTGGV
ATGCCAGACN--------
 A C G T A C G T A C T G A G T C A G T C C G T A A C T G C G T A A T C G C T A G T C G A G T C A C T A G A G T C A G C T C T A G C T A G T C G A
C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0195.1_Zbtb3_2/Jaspar

Match Rank:2
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GCCAGAGGVAGCTGGV
NNNNTGCCAGTGATTG-----
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C T G C G T A A T C G C T A G T C G A G T C A C T A G A G T C A G C T C T A G C T A G T C G A
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G A C G T A C G T A C G T A C G T A C G T

Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCCAGAGGVAGCTGGV-
NAAACCGGTTNNAACCGGTT
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C T G C G T A A T C G C T A G T C G A G T C A C T A G A G T C A G C T C T A G C T A G T C G A A C G T
T G A C T C G A C T G A C T G A A T G C G A T C C T A G T A C G G A C T G A C T G A T C T C G A C T G A C T G A A T G C G A T C C T A G A T C G G A C T G A C T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGAGGVAGCTGGV
TGCCAA-----------
 A C G T A C T G A G T C A G T C C G T A A C T G C G T A A T C G C T A G T C G A G T C A C T A G A G T C A G C T C T A G C T A G T C G A
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCCAGAGGVAGCTGGV
AGCCTCAGGCA------
 A C G T A C T G A G T C A G T C C G T A A C T G C G T A A T C G C T A G T C G A G T C A C T A G A G T C A G C T C T A G C T A G T C G A
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCCAGAGGVAGCTGGV
ATTGCCTGAGGCAAT----
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C T G C G T A A T C G C T A G T C G A G T C A C T A G A G T C A G C T C T A G C T A G T C G A
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCCAGAGGVAGCTGGV
CGTGCCAAG----------
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C T G C G T A A T C G C T A G T C G A G T C A C T A G A G T C A G C T C T A G C T A G T C G A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCCAGAGGVAGCTGGV
NGCCTGAGGCN------
 A C G T A C T G A G T C A G T C C G T A A C T G C G T A A T C G C T A G T C G A G T C A C T A G A G T C A G C T C T A G C T A G T C G A
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GCCAGAGGVAGCTGGV
AGCCTCAGGCA------
 A C G T A C T G A G T C A G T C C G T A A C T G C G T A A T C G C T A G T C G A G T C A C T A G A G T C A G C T C T A G C T A G T C G A
G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GCCAGAGGVAGCTGGV
ANTGCCTGAGGCAAN----
 A C G T A C G T A C G T A C T G A G T C A G T C C G T A A C T G C G T A A T C G C T A G T C G A G T C A C T A G A G T C A G C T C T A G C T A G T C G A
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T A C G T A C G T A C G T A C G T