Information for 1-BYNVAAACCACAD (Motif 1)

A T G C G A T C T G C A T G C A C G T A C G T A C G T A A G T C A G T C C G T A A G T C G C T A C A T G
Reverse Opposite:
G T A C C G A T A C T G G C A T A C T G A C T G A C G T A C G T C G A T A C G T A C G T C T A G T A C G
p-value:1e-71
log p-value:-1.653e+02
Information Content per bp:1.665
Number of Target Sequences with motif110.0
Percentage of Target Sequences with motif13.06%
Number of Background Sequences with motif612.8
Percentage of Background Sequences with motif1.29%
Average Position of motif in Targets52.1 +/- 23.8bp
Average Position of motif in Background50.9 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.96
Offset:4
Orientation:forward strand
Alignment:BYNVAAACCACAD-
----AAACCACANN
 A T G C G A T C T G C A T G C A C G T A C G T A C G T A A G T C A G T C C G T A A G T C G C T A C A T G A C G T
A C G T A C G T A C G T A C G T G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.95
Offset:3
Orientation:forward strand
Alignment:BYNVAAACCACAD
---NAAACCACAG
 A T G C G A T C T G C A T G C A C G T A C G T A C G T A A G T C A G T C C G T A A G T C G C T A C A T G
A C G T A C G T A C G T T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.93
Offset:4
Orientation:reverse strand
Alignment:BYNVAAACCACAD-
----AAACCACAGC
 A T G C G A T C T G C A T G C A C G T A C G T A C G T A A G T C A G T C C G T A A G T C G C T A C A T G A C G T
A C G T A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.92
Offset:4
Orientation:reverse strand
Alignment:BYNVAAACCACAD--
----AAACCACAGAN
 A T G C G A T C T G C A T G C A C G T A C G T A C G T A A G T C A G T C C G T A A G T C G C T A C A T G A C G T A C G T
A C G T A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.91
Offset:3
Orientation:forward strand
Alignment:BYNVAAACCACAD--
---NWAACCACADNN
 A T G C G A T C T G C A T G C A C G T A C G T A C G T A A G T C A G T C C G T A A G T C G C T A C A T G A C G T A C G T
A C G T A C G T A C G T T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX2/MA0511.2/Jaspar

Match Rank:6
Score:0.86
Offset:4
Orientation:forward strand
Alignment:BYNVAAACCACAD
----AAACCGCAA
 A T G C G A T C T G C A T G C A C G T A C G T A C G T A A G T C A G T C C G T A A G T C G C T A C A T G
A C G T A C G T A C G T A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.86
Offset:4
Orientation:forward strand
Alignment:BYNVAAACCACAD-
----AAACCGCAAA
 A T G C G A T C T G C A T G C A C G T A C G T A C G T A A G T C A G T C C G T A A G T C G C T A C A T G A C G T
A C G T A C G T A C G T A C G T G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.73
Offset:1
Orientation:forward strand
Alignment:BYNVAAACCACAD
-TCCAATCCACA-
 A T G C G A T C T G C A T G C A C G T A C G T A C G T A A G T C A G T C C G T A A G T C G C T A C A T G
A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.72
Offset:5
Orientation:forward strand
Alignment:BYNVAAACCACAD
-----ATCCAC--
 A T G C G A T C T G C A T G C A C G T A C G T A C G T A A G T C A G T C C G T A A G T C G C T A C A T G
A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:10
Score:0.71
Offset:4
Orientation:forward strand
Alignment:BYNVAAACCACAD--
----AAATCACAGCA
 A T G C G A T C T G C A T G C A C G T A C G T A C G T A A G T C A G T C C G T A A G T C G C T A C A T G A C G T A C G T
A C G T A C G T A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A