Information for 8-TGAGAATATTTCT (Motif 9)

A G C T C T A G C G T A C T A G G T C A T C G A G C A T C G T A A C G T C G A T A C G T A G T C A C G T
Reverse Opposite:
C G T A C T A G C G T A C G T A C G T A A C G T C G T A A C G T A C G T A G T C A C G T A G T C C T G A
p-value:1e-12
log p-value:-2.868e+01
Information Content per bp:1.834
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.35%
Number of Background Sequences with motif22.4
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets49.5 +/- 27.1bp
Average Position of motif in Background45.1 +/- 23.6bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:TGAGAATATTTCT
-AAGGATATNTN-
 A G C T C T A G C G T A C T A G G T C A T C G A G C A T C G T A A C G T C G A T A C G T A G T C A C G T
A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T A C G T

Arid5a/MA0602.1/Jaspar

Match Rank:2
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TGAGAATATTTCT---
--CTAATATTGCTAAA
 A G C T C T A G C G T A C T A G G T C A T C G A G C A T C G T A A C G T C G A T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:TGAGAATATTTCT---
--CTAATATTGCTAAA
 A G C T C T A G C G T A C T A G G T C A T C G A G C A T C G T A A C G T C G A T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

BHLHE23/MA0817.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TGAGAATATTTCT
-NAACATATGTTT
 A G C T C T A G C G T A C T A G G T C A T C G A G C A T C G T A A C G T C G A T A C G T A G T C A C G T
A C G T G C T A C T G A T G C A T G A C C T G A A C G T T C G A G A C T A C T G A C G T A G C T G C A T

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TGAGAATATTTCT---
----KCTATTTTTRGH
 A G C T C T A G C G T A C T A G G T C A T C G A G C A T C G T A A C G T C G A T A C G T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G A G T C G A C T C G T A C G A T G C A T G C A T G C A T C G A T C T G A C A T G G T A C

Foxd3/MA0041.1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TGAGAATATTTCT--
---GAATGTTTGTTT
 A G C T C T A G C G T A C T A G G T C A T C G A G C A T C G T A A C G T C G A T A C G T A G T C A C G T A C G T A C G T
A C G T A C G T A C G T C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:7
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TGAGAATATTTCT
---GAATATTCAT
 A G C T C T A G C G T A C T A G G T C A T C G A G C A T C G T A A C G T C G A T A C G T A G T C A C G T
A C G T A C G T A C G T T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T

MEF2C/MA0497.1/Jaspar

Match Rank:8
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TGAGAATATTTCT-----
---TTCTATTTTTAGNNN
 A G C T C T A G C G T A C T A G G T C A T C G A G C A T C G T A A C G T C G A T A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T C A G T A G T C A G C T C T G A G C A T G C A T G A C T G A C T C G A T C T G A C A T G G T A C G C T A G A C T

OLIG3/MA0827.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:TGAGAATATTTCT
--ACCATATGTT-
 A G C T C T A G C G T A C T A G G T C A T C G A G C A T C G T A A C G T C G A T A C G T A G T C A C G T
A C G T A C G T T C G A T G A C G T A C C T G A A C G T T G C A G A C T A C T G A C G T G A C T A C G T

NEUROG2/MA0669.1/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TGAGAATATTTCT
--AACATATGTC-
 A G C T C T A G C G T A C T A G G T C A T C G A G C A T C G T A A C G T C G A T A C G T A G T C A C G T
A C G T A C G T T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C A C G T