Information for 5-AACCACAKATCGCAGC (Motif 19)

C G T A C G T A A T G C A G T C G T C A G A T C C G T A A C T G G C T A A C G T G T A C A T C G A T G C C G T A A T C G A G T C
Reverse Opposite:
C T A G A T G C G A C T A T C G A T G C C A T G G T C A C G A T T G A C C G A T C A T G A C G T C T A G T A C G C G A T A C G T
p-value:1e-10
log p-value:-2.350e+01
Information Content per bp:1.725
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif12.0
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets47.0 +/- 20.5bp
Average Position of motif in Background57.9 +/- 14.3bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AACCACAKATCGCAGC
AAACCACANN-------
 A C G T C G T A C G T A A T G C A G T C G T C A G A T C C G T A A C T G G C T A A C G T G T A C A T C G A T G C C G T A A T C G A G T C
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AACCACAKATCGCAGC
NAAACCACAG--------
 A C G T A C G T C G T A C G T A A T G C A G T C G T C A G A T C C G T A A C T G G C T A A C G T G T A C A T C G A T G C C G T A A T C G A G T C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AACCACAKATCGCAGC
AAACCACAGC-------
 A C G T C G T A C G T A A T G C A G T C G T C A G A T C C G T A A C T G G C T A A C G T G T A C A T C G A T G C C G T A A T C G A G T C
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-AACCACAKATCGCAGC
AAACCACAGAN------
 A C G T C G T A C G T A A T G C A G T C G T C A G A T C C G T A A C T G G C T A A C G T G T A C A T C G A T G C C G T A A T C G A G T C
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AACCACAKATCGCAGC
NWAACCACADNN------
 A C G T A C G T C G T A C G T A A T G C A G T C G T C A G A T C C G T A A C T G G C T A A C G T G T A C A T C G A T G C C G T A A T C G A G T C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T A C G T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AACCACAKATCGCAGC
AAACCGCAAA-------
 A C G T C G T A C G T A A T G C A G T C G T C A G A T C C G T A A C T G G C T A A C G T G T A C A T C G A T G C C G T A A T C G A G T C
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-AACCACAKATCGCAGC
AAACCGCAA--------
 A C G T C G T A C G T A A T G C A G T C G T C A G A T C C G T A A C T G G C T A A C G T G T A C A T C G A T G C C G T A A T C G A G T C
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---AACCACAKATCGCAGC
CATAACCACTTAACAAC--
 A C G T A C G T A C G T C G T A C G T A A T G C A G T C G T C A G A T C C G T A A C T G G C T A A C G T G T A C A T C G A T G C C G T A A T C G A G T C
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C A C G T A C G T

MF0008.1_MADS_class/Jaspar

Match Rank:9
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:AACCACAKATCGCAGC
--CCATATATGG----
 C G T A C G T A A T G C A G T C G T C A G A T C C G T A A C T G G C T A A C G T G T A C A T C G A T G C C G T A A T C G A G T C
A C G T A C G T G T A C G A T C C G T A G C A T C G T A G C A T G C T A C G A T T C A G C T A G A C G T A C G T A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AACCACAKATCGCAGC
ATCCAC----------
 C G T A C G T A A T G C A G T C G T C A G A T C C G T A A C T G G C T A A C G T G T A C A T C G A T G C C G T A A T C G A G T C
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T