Information for 7-CCWTGSAGCDGGTGMA (Motif 5)

A G T C A G T C C G T A A C G T A C T G A T G C C G T A A C T G A T G C C G T A A T C G T A C G A C G T A C T G G T A C T C G A
Reverse Opposite:
A C G T A C T G A G T C G T C A A T G C A T G C G A C T A T C G A G T C A C G T A T C G A G T C G T C A C G A T A C T G A C T G
p-value:1e-12
log p-value:-2.804e+01
Information Content per bp:1.782
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.83%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets67.6 +/- 15.8bp
Average Position of motif in Background45.4 +/- 14.4bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CCWTGSAGCDGGTGMA
----NCAGCTGCTG--
 A G T C A G T C C G T A A C G T A C T G A T G C C G T A A C T G A T G C C G T A A T C G T A C G A C G T A C T G G T A C T C G A
A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CCWTGSAGCDGGTGMA-
-----SDGCAGGTGCNS
 A G T C A G T C C G T A A C G T A C T G A T G C C G T A A C T G A T G C C G T A A T C G T A C G A C G T A C T G G T A C T C G A A C G T
A C G T A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CCWTGSAGCDGGTGMA
NNNNAGCAGCTGCTGAN
 A C G T A G T C A G T C C G T A A C G T A C T G A T G C C G T A A C T G A T G C C G T A A T C G T A C G A C G T A C T G G T A C T C G A
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CCWTGSAGCDGGTGMA
---AGCAGCTGCTNN-
 A G T C A G T C C G T A A C G T A C T G A T G C C G T A A C T G A T G C C G T A A T C G T A C G A C G T A C T G G T A C T C G A
A C G T A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CCWTGSAGCDGGTGMA
---AGCAGCTGCT---
 A G T C A G T C C G T A A C G T A C T G A T G C C G T A A C T G A T G C C G T A A T C G T A C G A C G T A C T G G T A C T C G A
A C G T A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T A C G T

SCRT2/MA0744.1/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CCWTGSAGCDGGTGMA
--ATGCAACAGGTGG-
 A G T C A G T C C G T A A C G T A C T G A T G C C G T A A C T G A T G C C G T A A T C G T A C G A C G T A C T G G T A C T C G A
A C G T A C G T T C G A G C A T A C T G G T A C T G C A C G T A G T A C G T C A T C A G A T C G G C A T C A T G A T C G A C G T

Myod1/MA0499.1/Jaspar

Match Rank:7
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:CCWTGSAGCDGGTGMA
---NGNGACAGCTGCN
 A G T C A G T C C G T A A C G T A C T G A T G C C G T A A C T G A T G C C G T A A T C G T A C G A C G T A C T G G T A C T C G A
A C G T A C G T A C G T T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A

NHLH1/MA0048.2/Jaspar

Match Rank:8
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CCWTGSAGCDGGTGMA
---CGCAGCTGCG---
 A G T C A G T C C G T A A C G T A C T G A T G C C G T A A C T G A T G C C G T A A T C G T A C G A C G T A C T G G T A C T C G A
A C G T A C G T A C G T T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.52
Offset:5
Orientation:reverse strand
Alignment:CCWTGSAGCDGGTGMA
-----CAGCTGNT---
 A G T C A G T C C G T A A C G T A C T G A T G C C G T A A C T G A T G C C G T A A T C G T A C G A C G T A C T G G T A C T C G A
A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.52
Offset:5
Orientation:forward strand
Alignment:CCWTGSAGCDGGTGMA
-----CAGCC------
 A G T C A G T C C G T A A C G T A C T G A T G C C G T A A C T G A T G C C G T A A T C G T A C G A C G T A C T G G T A C T C G A
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T