p-value: | 1e-8 |
log p-value: | -1.874e+01 |
Information Content per bp: | 1.840 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.59% |
Number of Background Sequences with motif | 1.9 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 63.8 +/- 16.8bp |
Average Position of motif in Background | 66.2 +/- 28.2bp |
Strand Bias (log2 ratio + to - strand density) | -0.6 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 1 |
Score: | 0.64 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GAGACAGCCTCTG CCAGACAG------ |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 2 |
Score: | 0.63 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GAGACAGCCTCTG CCAGACRSVB---- |
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PB0151.1_Myf6_2/Jaspar
Match Rank: | 3 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GAGACAGCCTCTG- AGCAACAGCCGCACC |
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POL009.1_DCE_S_II/Jaspar
Match Rank: | 4 |
Score: | 0.58 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GAGACAGCCTCTG --CACAGN----- |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 5 |
Score: | 0.57 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------GAGACAGCCTCTG CAAATCCAGACATCACA-- |
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PH0141.1_Pknox2/Jaspar
Match Rank: | 6 |
Score: | 0.56 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GAGACAGCCTCTG NNATTGACAGGTGCTT |
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PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer
Match Rank: | 7 |
Score: | 0.55 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GAGACAGCCTCTG TGAGTGACAGSC---- |
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MEIS2/MA0774.1/Jaspar
Match Rank: | 8 |
Score: | 0.55 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GAGACAGCCTCTG TTGACAGC----- |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 9 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GAGACAGCCTCTG BCAGACWA------ |
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KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 10 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GAGACAGCCTCTG GGACACACCCCC-- |
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