Information for 9-AGAACTTGTT (Motif 12)

C G T A A C T G C G T A C G T A A G T C A C G T A C G T C T A G A C G T C G A T
Reverse Opposite:
C G T A C G T A A G T C C G T A C G T A A C T G A C G T A C G T A G T C C G A T
p-value:1e-7
log p-value:-1.838e+01
Information Content per bp:1.901
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.03%
Number of Background Sequences with motif31.6
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets46.9 +/- 29.0bp
Average Position of motif in Background51.5 +/- 19.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HLTF/MA0109.1/Jaspar

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AGAACTTGTT-
-AACCTTATAT
 C G T A A C T G C G T A C G T A A G T C A C G T A C G T C T A G A C G T C G A T A C G T
A C G T C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T

PB0175.1_Sox4_2/Jaspar

Match Rank:2
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--AGAACTTGTT-----
GGAAAAATTGTTAGGAA
 A C G T A C G T C G T A A C T G C G T A C G T A A G T C A C G T A C G T C T A G A C G T C G A T A C G T A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

PB0194.1_Zbtb12_2/Jaspar

Match Rank:3
Score:0.61
Offset:-7
Orientation:forward strand
Alignment:-------AGAACTTGTT
TATCATTAGAACGCT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A G T C A C G T A C G T C T A G A C G T C G A T
G C A T T G C A G A C T A T G C T C G A C G A T C A G T C T G A C A T G G C T A G T C A G T A C A C T G A G T C C G A T A C G T A C G T

PH0117.1_Nkx3-1/Jaspar

Match Rank:4
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------AGAACTTGTT-
NATTTAAGTACTTANNA
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A G T C A C G T A C G T C T A G A C G T C G A T A C G T
T A G C G C T A C G A T G A C T C G A T C T G A C T G A A T C G A G C T T C G A A T G C G A C T G A C T G C T A C T A G G C A T G C T A

PH0112.1_Nkx2-3/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----AGAACTTGTT-
CTTTAAGTACTTAATG
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A G T C A C G T A C G T C T A G A C G T C G A T A C G T
G A T C A G C T A G C T G C A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C T G A G A C T C T A G

PH0116.1_Nkx2-9/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----AGAACTTGTT--
TTTTAAGTACTTAAATT
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A C G T A A G T C A C G T A C G T C T A G A C G T C G A T A C G T A C G T
C G A T G A C T G C A T C G A T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T T C G A C G T A G C T A C G A T G A C T

PB0165.1_Sox11_2/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGAACTTGTT-----
-AAAATTGTTATGAA
 C G T A A C T G C G T A C G T A A G T C A C G T A C G T C T A G A C G T C G A T A C G T A C G T A C G T A C G T A C G T
A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

PH0086.1_Irx5/Jaspar

Match Rank:8
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AGAACTTGTT----
ANTNNTACATGTANNTN
 A C G T A C G T A C G T C G T A A C T G C G T A C G T A A G T C A C G T A C G T C T A G A C G T C G A T A C G T A C G T A C G T A C G T
G C T A G T C A G C A T G C A T C A G T C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A C G A T G C T A G C A T G C A T

PH0085.1_Irx4/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGAACTTGTT-----
AATATACATGTAAAACA
 A C G T A C G T C G T A A C T G C G T A C G T A A G T C A C G T A C G T C T A G A C G T C G A T A C G T A C G T A C G T A C G T A C G T
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGAACTTGTT
AAGCACTTAA-
 A C G T C G T A A C T G C G T A C G T A A G T C A C G T A C G T C T A G A C G T C G A T
T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T