Information for 8-TGCAGGACAT (Motif 11)

A C G T C A T G G T A C C G T A A C T G A C T G G C T A G A T C G C T A C A G T
Reverse Opposite:
G T C A C G A T C T A G C G A T A G T C A G T C C G A T A C T G G A T C G T C A
p-value:1e-8
log p-value:-1.969e+01
Information Content per bp:1.828
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif2.52%
Number of Background Sequences with motif246.1
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets55.7 +/- 30.3bp
Average Position of motif in Background50.2 +/- 29.6bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:TGCAGGACAT
NACAGGAAAT
 A C G T C A T G G T A C C G T A A C T G A C T G G C T A G A T C G C T A C A G T
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:2
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TGCAGGACAT
NACAGGAAAT
 A C G T C A T G G T A C C G T A A C T G A C T G G C T A G A T C G C T A C A G T
T G C A C T G A A G T C G T C A A C T G A C T G C G T A C G T A C T G A A G C T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGCAGGACAT
ANCAGGATGT
 A C G T C A T G G T A C C G T A A C T G A C T G G C T A G A T C G C T A C A G T
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:4
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TGCAGGACAT-
-ACAGGAAGTG
 A C G T C A T G G T A C C G T A A C T G A C T G G C T A G A T C G C T A C A G T A C G T
A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGCAGGACAT--
NDCAGGAARTNN
 A C G T C A T G G T A C C G T A A C T G A C T G G C T A G A T C G C T A C A G T A C G T A C G T
T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGCAGGACAT
-TRAGGTCA-
 A C G T C A T G G T A C C G T A A C T G A C T G G C T A G A T C G C T A C A G T
A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TGCAGGACAT---
--AAGGATATNTN
 A C G T C A T G G T A C C G T A A C T G A C T G G C T A G A T C G C T A C A G T A C G T A C G T A C G T
A C G T A C G T T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:forward strand
Alignment:TGCAGGACAT
---AGGTCA-
 A C G T C A T G G T A C C G T A A C T G A C T G G C T A G A T C G C T A C A G T
A C G T A C G T A C G T C T G A C A T G C A T G C G A T G T A C T G C A A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGCAGGACAT
TCAAGGTCAT
 A C G T C A T G G T A C C G T A A C T G A C T G G C T A G A T C G C T A C A G T
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T

RORA/MA0071.1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TGCAGGACAT
ATCAAGGTCA-
 A C G T A C G T C A T G G T A C C G T A A C T G A C T G G C T A G A T C G C T A C A G T
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T