Information for 9-AGCTTGAGGT (Motif 11)

C G T A A C T G A G T C A C G T A C G T A C T G C G T A A C T G A C T G A C G T
Reverse Opposite:
C G T A A G T C A G T C A C G T A G T C C G T A C G T A A C T G A G T C A C G T
p-value:1e-1
log p-value:-3.303e+00
Information Content per bp:1.530
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.11%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.5 +/- 25.7bp
Average Position of motif in Background43.4 +/- 21.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)4.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-AGCTTGAGGT
AAGCTTG----
 A C G T C G T A A C T G A G T C A C G T A C G T A C T G C G T A A C T G A C T G A C G T
C G T A C G T A A C T G A T G C A C G T A C G T C T A G A C G T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:2
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:AGCTTGAGGT--
---TTGCGGTTT
 C G T A A C T G A G T C A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:AGCTTGAGGT-
NGCCTGAGGCN
 C G T A A C T G A G T C A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

RUNX3/MA0684.1/Jaspar

Match Rank:4
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:AGCTTGAGGT--
--TTTGCGGTTT
 C G T A A C T G A G T C A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:5
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AGCTTGAGGT
----TGACGT
 C G T A A C T G A G T C A C G T A C G T A C T G C G T A A C T G A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AGCTTGAGGT-
NGCCTNAGGCN
 C G T A A C T G A G T C A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C G T
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:7
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGCTTGAGGT---
-NNHTGTGGTTWN
 C G T A A C T G A G T C A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGCTTGAGGT-
TGCCTGAGGCN
 C G T A A C T G A G T C A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C G T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGCTTGAGGT--
-GTCTGTGGTTT
 C G T A A C T G A G T C A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C G T A C G T
A C G T A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AGCTTGAGGT---
---CTGTGGTTTN
 C G T A A C T G A G T C A C G T A C G T A C T G C G T A A C T G A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G