Information for 5-GCTTAACTTTTGACTT (Motif 7)

C T A G A G T C C G A T A C G T C T G A C T G A G A T C A C G T A C G T A G C T A C G T A T C G C G T A A G T C A C G T C G A T
Reverse Opposite:
C G T A C G T A C T A G G A C T A T G C G T C A C T G A C G T A C G T A C A T G A G C T A G C T C G T A C G T A A C T G A G T C
p-value:1e-13
log p-value:-3.168e+01
Information Content per bp:1.781
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets31.8 +/- 9.8bp
Average Position of motif in Background49.1 +/- 17.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e1/MA0676.1/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCTTAACTTTTGACTT
--TTGACTTTT-----
 C T A G A G T C C G A T A C G T C T G A C T G A G A T C A C G T A C G T A G C T A C G T A T C G C G T A A G T C A C G T C G A T
A C G T A C G T C G A T A C G T T C A G C T G A G A T C G A C T G A C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:2
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GCTTAACTTTTGACTT--
-GTTGACCTTTGACCTTT
 C T A G A G T C C G A T A C G T C T G A C T G A G A T C A C G T A C G T A G C T A C G T A T C G C G T A A G T C A C G T C G A T A C G T A C G T
A C G T T A C G G A C T A C G T A C T G C G T A A G T C A G T C A C G T C G A T A C G T A C T G C G T A G T A C A G T C A G C T G A C T C A G T

Rarb/MA0857.1/Jaspar

Match Rank:3
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GCTTAACTTTTGACTT--
--TGACCTTTTGACCTTT
 C T A G A G T C C G A T A C G T C T G A C T G A G A T C A C G T A C G T A G C T A C G T A T C G C G T A A G T C A C G T C G A T A C G T A C G T
A C G T A C G T G A C T T C A G T C G A T G A C A G T C A G C T G A C T C G A T A G C T T A C G G T C A T G A C G T A C A G C T G A C T C G A T

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:4
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:GCTTAACTTTTGACTT-
---TGACCTTTGACCTC
 C T A G A G T C C G A T A C G T C T G A C T G A G A T C A C G T A C G T A G C T A C G T A T C G C G T A A G T C A C G T C G A T A C G T
A C G T A C G T A C G T G A C T T A C G T G C A G T A C G A T C A G C T G A C T G A C T T A C G T G C A G T A C G A T C G A C T A G T C

Rarg/MA0859.1/Jaspar

Match Rank:5
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GCTTAACTTTTGACTT-
-TTGACCTTTTGACCTT
 C T A G A G T C C G A T A C G T C T G A C T G A G A T C A C G T A C G T A G C T A C G T A T C G C G T A A G T C A C G T C G A T A C G T
A C G T C G A T A G C T T C A G T G C A T G A C G T A C A G C T G A C T G C A T A G C T T C A G T G C A T G A C A G T C A G C T A G C T

Nr2f6/MA0677.1/Jaspar

Match Rank:6
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GCTTAACTTTTGACTT-
---TGACCTTTGACCTN
 C T A G A G T C C G A T A C G T C T G A C T G A G A T C A C G T A C G T A G C T A C G T A T C G C G T A A G T C A C G T C G A T A C G T
A C G T A C G T A C G T A G C T T C A G T G C A G T A C G T A C A G C T G A C T G A C T T C A G T G C A G T A C G T A C A G C T A G T C

PB0037.1_Isgf3g_1/Jaspar

Match Rank:7
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GCTTAACTTTTGACTT--
---TNAGTTTCGATTTTN
 C T A G A G T C C G A T A C G T C T G A C T G A G A T C A C G T A C G T A G C T A C G T A T C G C G T A A G T C A C G T C G A T A C G T A C G T
A C G T A C G T A C G T C A G T G C A T C T G A A T C G C G A T G C A T A C G T A G T C C T A G C G T A C G A T G C A T G A C T G A C T A C T G

PB0042.1_Mafk_1/Jaspar

Match Rank:8
Score:0.50
Offset:1
Orientation:forward strand
Alignment:GCTTAACTTTTGACTT
-TAAAAATGCTGACTT
 C T A G A G T C C G A T A C G T C T G A C T G A G A T C A C G T A C G T A G C T A C G T A T C G C G T A A G T C A C G T C G A T
A C G T C G A T C G T A C G T A C G T A G C T A C G T A G A C T C A T G G T A C G C A T C A T G C G T A A G T C G C A T G A C T

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:9
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:GCTTAACTTTTGACTT
--TTAATGTTTAACC-
 C T A G A G T C C G A T A C G T C T G A C T G A G A T C A C G T A C G T A G C T A C G T A T C G C G T A A G T C A C G T C G A T
A C G T A C G T A C G T G C A T C T G A G T C A G C A T T A C G C G A T C A G T G A C T G C T A C G T A G A T C G A T C A C G T

Pax6/MA0069.1/Jaspar

Match Rank:10
Score:0.50
Offset:-5
Orientation:forward strand
Alignment:-----GCTTAACTTTTGACTT
TTCACGCATGAGTT-------
 A C G T A C G T A C G T A C G T A C G T C T A G A G T C C G A T A C G T C T G A C T G A G A T C A C G T A C G T A G C T A C G T A T C G C G T A A G T C A C G T C G A T
A C G T G A C T G A T C G T C A G A T C C A T G A T G C C G T A A G C T A T C G C T G A T A C G A G C T C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T