Information for 19-ACAAGTAGCACTTMAT (Motif 27)

C G T A T A G C C G T A C T G A C T A G G C A T C G T A A C T G G A T C G C T A A T G C A C G T C A G T G T C A G T C A C G A T
Reverse Opposite:
G C T A A C G T C A G T G T C A C G T A A T C G C G A T C T A G G T A C G A C T C G T A A G T C A G C T A C G T A C T G C G A T
p-value:1e-8
log p-value:-1.881e+01
Information Content per bp:1.706
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.6 +/- 36.7bp
Average Position of motif in Background37.6 +/- 38.1bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:1
Score:0.60
Offset:5
Orientation:forward strand
Alignment:ACAAGTAGCACTTMAT
-----AAGCACTTAA-
 C G T A T A G C C G T A C T G A C T A G G C A T C G T A A C T G G A T C G C T A A T G C A C G T C A G T G T C A G T C A C G A T
A C G T A C G T A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A A C G T

ISL2/MA0914.1/Jaspar

Match Rank:2
Score:0.59
Offset:7
Orientation:forward strand
Alignment:ACAAGTAGCACTTMAT
-------GCACTTAA-
 C G T A T A G C C G T A C T G A C T A G G C A T C G T A A C T G G A T C G C T A A T G C A C G T C A G T G T C A G T C A C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T

NKX3-2/MA0122.2/Jaspar

Match Rank:3
Score:0.59
Offset:6
Orientation:forward strand
Alignment:ACAAGTAGCACTTMAT
------ACCACTTAA-
 C G T A T A G C C G T A C T G A C T A G G C A T C G T A A C T G G A T C G C T A A T G C A C G T C A G T G T C A G T C A C G A T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:4
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:ACAAGTAGCACTTMAT
-----MRSCACTYAA-
 C G T A T A G C C G T A C T G A C T A G G C A T C G T A A C T G G A T C G C T A A T G C A C G T C A G T G T C A G T C A C G A T
A C G T A C G T A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:5
Score:0.58
Offset:6
Orientation:forward strand
Alignment:ACAAGTAGCACTTMAT
------ACCACTTAA-
 C G T A T A G C C G T A C T G A C T A G G C A T C G T A A C T G G A T C G C T A A T G C A C G T C A G T G T C A G T C A C G A T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:6
Score:0.57
Offset:5
Orientation:forward strand
Alignment:ACAAGTAGCACTTMAT
-----AASCACTCAA-
 C G T A T A G C C G T A C T G A C T A G G C A T C G T A A C T G G A T C G C T A A T G C A C G T C A G T G T C A G T C A C G A T
A C G T A C G T A C G T A C G T A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A A C G T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:7
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:ACAAGTAGCACTTMAT
------NSCACTYVAV
 C G T A T A G C C G T A C T G A C T A G G C A T C G T A A C T G G A T C G C T A A T G C A C G T C A G T G T C A G T C A C G A T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A G C A G T C G C T A G A T C A C G T G A T C T C G A C T G A T A C G

PB0091.1_Zbtb3_1/Jaspar

Match Rank:8
Score:0.57
Offset:3
Orientation:forward strand
Alignment:ACAAGTAGCACTTMAT----
---AATCGCACTGCATTCCG
 C G T A T A G C C G T A C T G A C T A G G C A T C G T A A C T G G A T C G C T A A T G C A C G T C A G T G T C A G T C A C G A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:9
Score:0.57
Offset:6
Orientation:forward strand
Alignment:ACAAGTAGCACTTMAT
------RSCACTYRAG
 C G T A T A G C C G T A C T G A C T A G G C A T C G T A A C T G G A T C G C T A A T G C A C G T C A G T G T C A G T C A C G A T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C C G T A A G T C A C G T A G T C T C G A C G T A T A C G

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.56
Offset:7
Orientation:forward strand
Alignment:ACAAGTAGCACTTMAT
-------CCACTTGAA
 C G T A T A G C C G T A C T G A C T A G G C A T C G T A A C T G G A T C G C T A A T G C A C G T C A G T G T C A G T C A C G A T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A