Information for 15-ATGTGGSACAGTCMCA (Motif 19)

G T C A G C A T T C A G A C G T C T A G C T A G T A C G T G C A T G A C C G T A C A T G C G A T A T G C G T A C G T A C G C T A
Reverse Opposite:
C G A T A C T G C A T G T A C G G C T A G T A C C G A T A C T G A C G T A T G C G A T C G A T C G T C A A G T C C G T A C A G T
p-value:1e-9
log p-value:-2.268e+01
Information Content per bp:1.585
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif4.07%
Number of Background Sequences with motif441.9
Percentage of Background Sequences with motif0.95%
Average Position of motif in Targets50.1 +/- 23.9bp
Average Position of motif in Background50.8 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:forward strand
Alignment:ATGTGGSACAGTCMCA-
---TGGCACCATGCCAA
 G T C A G C A T T C A G A C G T C T A G C T A G T A C G T G C A T G A C C G T A C A T G C G A T A T G C G T A C G T A C G C T A A C G T
A C G T A C G T A C G T A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ATGTGGSACAGTCMCA--
--TTGGCANNNTGCCAAG
 G T C A G C A T T C A G A C G T C T A G C T A G T A C G T G C A T G A C C G T A C A T G C G A T A T G C G T A C G T A C G C T A A C G T A C G T
A C G T A C G T G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:3
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ATGTGGSACAGTCMCA
AGGTGTGAAM------
 G T C A G C A T T C A G A C G T C T A G C T A G T A C G T G C A T G A C C G T A C A T G C G A T A T G C G T A C G T A C G C T A
C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:4
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:ATGTGGSACAGTCMCA-
---TGGCAGNCTGCCAG
 G T C A G C A T T C A G A C G T C T A G C T A G T A C G T G C A T G A C C G T A C A T G C G A T A T G C G T A C G T A C G C T A A C G T
A C G T A C G T A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:5
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:ATGTGGSACAGTCMCA
-CSTGGGAAAD-----
 G T C A G C A T T C A G A C G T C T A G C T A G T A C G T G C A T G A C C G T A C A T G C G A T A T G C G T A C G T A C G C T A
A C G T A G T C T A C G C G A T A C T G C T A G A C T G C G T A C T G A G T C A C T G A A C G T A C G T A C G T A C G T A C G T

RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-ATGTGGSACAGTCMCA
CAKCTGKYCYYTTYCCC
 A C G T G T C A G C A T T C A G A C G T C T A G C T A G T A C G T G C A T G A C C G T A C A T G C G A T A T G C G T A C G T A C G C T A
T G A C G C T A A C G T T G A C C G A T A C T G A C T G A G T C A G T C A G T C A G C T A G C T A G C T A G C T G A T C T G A C G T A C

TBR1/MA0802.1/Jaspar

Match Rank:7
Score:0.51
Offset:0
Orientation:forward strand
Alignment:ATGTGGSACAGTCMCA
AGGTGTGAAA------
 G T C A G C A T T C A G A C G T C T A G C T A G T A C G T G C A T G A C C G T A C A T G C G A T A T G C G T A C G T A C G C T A
C T G A C T A G A T C G A G C T A T C G G A C T A C T G C T G A G C T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:8
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:ATGTGGSACAGTCMCA---
---TGACCCAGTGACCTAC
 G T C A G C A T T C A G A C G T C T A G C T A G T A C G T G C A T G A C C G T A C A T G C G A T A T G C G T A C G T A C G C T A A C G T A C G T A C G T
A C G T A C G T A C G T G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

TBX2/MA0688.1/Jaspar

Match Rank:9
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-ATGTGGSACAGTCMCA
AAGGTGTGAAA------
 A C G T G T C A G C A T T C A G A C G T C T A G C T A G T A C G T G C A T G A C C G T A C A T G C G A T A T G C G T A C G T A C G C T A
C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

EOMES/MA0800.1/Jaspar

Match Rank:10
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-ATGTGGSACAGTCMCA
AAGGTGTGAAAAT----
 A C G T G T C A G C A T T C A G A C G T C T A G C T A G T A C G T G C A T G A C C G T A C A T G C G A T A T G C G T A C G T A C G C T A
C T G A C T G A C T A G A C T G A G C T T C A G G A C T A C T G T C G A G C T A G T C A C G T A G A C T A C G T A C G T A C G T A C G T