Information for 1-RTTGCGHAAYHNN (Motif 1)

T C G A A C G T A C G T C T A G G A T C T C A G G A T C G T C A C G T A A G C T G T C A C A G T C G A T
Reverse Opposite:
C G T A G T C A C A G T T C G A A C G T A C G T C T A G A G T C C T A G G A T C C G T A C G T A A G C T
p-value:1e-342
log p-value:-7.894e+02
Information Content per bp:1.557
Number of Target Sequences with motif466.0
Percentage of Target Sequences with motif65.45%
Number of Background Sequences with motif3339.1
Percentage of Background Sequences with motif7.19%
Average Position of motif in Targets51.0 +/- 18.5bp
Average Position of motif in Background50.1 +/- 31.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CEBPE/MA0837.1/Jaspar

Match Rank:1
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:RTTGCGHAAYHNN
ATTGCGCAAT---
 T C G A A C G T A C G T C T A G G A T C T C A G G A T C G T C A C G T A A G C T G T C A C A G T C G A T
T C G A C G A T C A G T C A T G A G T C C T A G G A T C G T C A C T G A A G C T A C G T A C G T A C G T

CEBPB/MA0466.2/Jaspar

Match Rank:2
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:RTTGCGHAAYHNN
ATTGCGCAAT---
 T C G A A C G T A C G T C T A G G A T C T C A G G A T C G T C A C G T A A G C T G T C A C A G T C G A T
T C G A C A G T A C G T C A T G A G T C C T A G G A T C G T C A C T G A A G C T A C G T A C G T A C G T

CEBPD/MA0836.1/Jaspar

Match Rank:3
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:RTTGCGHAAYHNN
ATTGCGCAAT---
 T C G A A C G T A C G T C T A G G A T C T C A G G A T C G T C A C G T A A G C T G T C A C A G T C G A T
T C G A A C G T C A G T C A T G A G T C C T A G G A T C G T C A G T C A A G C T A C G T A C G T A C G T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:4
Score:0.90
Offset:0
Orientation:forward strand
Alignment:RTTGCGHAAYHNN
ATTGCATAA----
 T C G A A C G T A C G T C T A G G A T C T C A G G A T C G T C A C G T A A G C T G T C A C A G T C G A T
T C G A G A C T A C G T C T A G G A T C T C G A G A C T G T C A G C T A A C G T A C G T A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:5
Score:0.90
Offset:0
Orientation:forward strand
Alignment:RTTGCGHAAYHNN
ATTGCACAATA--
 T C G A A C G T A C G T C T A G G A T C T C A G G A T C G T C A C G T A A G C T G T C A C A G T C G A T
T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A A C G T A C G T

CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.89
Offset:0
Orientation:forward strand
Alignment:RTTGCGHAAYHNN
ATTGCGCAAC---
 T C G A A C G T A C G T C T A G G A T C T C A G G A T C G T C A C G T A A G C T G T C A C A G T C G A T
T G C A A G C T A C G T C T A G G A T C C T A G G A T C G T C A C T G A A G T C A C G T A C G T A C G T

CEBPG/MA0838.1/Jaspar

Match Rank:7
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:RTTGCGHAAYHNN
ATTGCGCAAT---
 T C G A A C G T A C G T C T A G G A T C T C A G G A T C G T C A C G T A A G C T G T C A C A G T C G A T
T C G A G C A T G A C T C T A G G A T C C T A G G A T C G T C A G T C A A G C T A C G T A C G T A C G T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:8
Score:0.87
Offset:0
Orientation:reverse strand
Alignment:RTTGCGHAAYHNN
VTTRCATAAY---
 T C G A A C G T A C G T C T A G G A T C T C A G G A T C G T C A C G T A A G C T G T C A C A G T C G A T
T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C A C G T A C G T A C G T

HLF/MA0043.2/Jaspar

Match Rank:9
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-RTTGCGHAAYHNN
CATTACGTAACC--
 A C G T T C G A A C G T A C G T C T A G G A T C T C A G G A T C G T C A C G T A A G C T G T C A C A G T C G A T
G A T C T C G A G C A T A C G T C T G A A G T C T C A G G A C T G T C A C G T A A G T C G T A C A C G T A C G T

DBP/MA0639.1/Jaspar

Match Rank:10
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-RTTGCGHAAYHNN
NGTTACGTAATN--
 A C G T T C G A A C G T A C G T C T A G G A T C T C A G G A T C G T C A C G T A A G C T G T C A C A G T C G A T
A G C T T C A G G A C T A C G T T C G A A G T C T C A G G A C T T G C A C G T A A G C T T G C A A C G T A C G T