Information for 4-RGKMCYTTGMSGTSSY (Motif 7)

C T G A A C T G A C G T G T A C A G T C A G C T A C G T A C G T A C T G G T A C A T G C A C T G A C G T A T C G A T G C A G T C
Reverse Opposite:
C T A G A T C G A T C G C G T A A G T C T A C G A C T G A G T C C G T A C G T A C T A G A C T G A C G T T G A C A G T C G A C T
p-value:1e-11
log p-value:-2.702e+01
Information Content per bp:1.780
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.87%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets51.2 +/- 18.4bp
Average Position of motif in Background43.2 +/- 16.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:1
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:RGKMCYTTGMSGTSSY
---CCTTTGAWGT---
 C T G A A C T G A C G T G T A C A G T C A G C T A C G T A C G T A C T G G T A C A T G C A C T G A C G T A T C G A T G C A G T C
A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A C T G C G T A C G T A A T C G A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:RGKMCYTTGMSGTSSY
---CCTTTGATGT---
 C T G A A C T G A C G T G T A C A G T C A G C T A C G T A C G T A C T G G T A C A T G C A C T G A C G T A T C G A T G C A G T C
A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:RGKMCYTTGMSGTSSY
-TNCCTTTGATGT---
 C T G A A C T G A C G T G T A C A G T C A G C T A C G T A C G T A C T G G T A C A T G C A C T G A C G T A T C G A T G C A G T C
A C G T C A G T A T G C A G T C A G T C A G C T A C G T A C G T T A C G C G T A C G A T T A C G G A C T A C G T A C G T A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:RGKMCYTTGMSGTSSY
TGGACTTTGNNCTCN-
 C T G A A C T G A C G T G T A C A G T C A G C T A C G T A C G T A C T G G T A C A T G C A C T G A C G T A T C G A T G C A G T C
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T T C A G T C A G G T C A G A T C G A C T A G T C G C A T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:5
Score:0.60
Offset:7
Orientation:forward strand
Alignment:RGKMCYTTGMSGTSSY
-------TGACGT---
 C T G A A C T G A C G T G T A C A G T C A G C T A C G T A C G T A C T G G T A C A T G C A C T G A C G T A T C G A T G C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T A C G T A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:RGKMCYTTGMSGTSSY
-TNCCTTTGATCTTN-
 C T G A A C T G A C G T G T A C A G T C A G C T A C G T A C G T A C T G G T A C A T G C A C T G A C G T A T C G A T G C A G T C
A C G T C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:7
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:RGKMCYTTGMSGTSSY
-----TTTGCGGTTT-
 C T G A A C T G A C G T G T A C A G T C A G C T A C G T A C G T A C T G G T A C A T G C A C T G A C G T A T C G A T G C A G T C
A C G T A C G T A C G T A C G T A C G T C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:RGKMCYTTGMSGTSSY
TGGACTTTGNNCTNTG
 C T G A A C T G A C G T G T A C A G T C A G C T A C G T A C G T A C T G G T A C A T G C A C T G A C G T A T C G A T G C A G T C
C G A T C T A G T C A G G T C A G T A C G A C T A G C T A C G T C T A G T C G A G T A C G A T C G A C T A G T C C G A T C A T G

RUNX2/MA0511.2/Jaspar

Match Rank:9
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:RGKMCYTTGMSGTSSY
------TTGCGGTTT-
 C T G A A C T G A C G T G T A C A G T C A G C T A C G T A C G T A C T G G T A C A T G C A C T G A C G T A T C G A T G C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--RGKMCYTTGMSGTSSY
ATTGGACTTTGACCCC--
 A C G T A C G T C T G A A C T G A C G T G T A C A G T C A G C T A C G T A C G T A C T G G T A C A T G C A C T G A C G T A T C G A T G C A G T C
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C A C G T A C G T