Information for 2-CTCAATTTTTCAA (Motif 4)

A G T C A C G T A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A G T C G T C A C G T A
Reverse Opposite:
C G A T A C G T A C T G C G T A C G T A C G T A C G T A G T C A A C G T A C G T A C T G C G T A A C T G
p-value:1e-11
log p-value:-2.702e+01
Information Content per bp:1.938
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.87%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets47.8 +/- 23.4bp
Average Position of motif in Background77.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:1
Score:0.71
Offset:-4
Orientation:reverse strand
Alignment:----CTCAATTTTTCAA---
NTGACTCANTTTTTCCANTN
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A G T C G T C A C G T A A C G T A C G T A C G T
T C G A G C A T A C T G C G T A A T G C G C A T G T A C C G T A A G C T G C A T A G C T A G C T G A C T A G C T A G T C A G T C G C T A A G C T G A C T A T G C

PB0173.1_Sox21_2/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTCAATTTTTCAA---
AATCAATTGTTCCGCTA
 A C G T A G T C A C G T A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A G T C G T C A C G T A A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

PB0065.1_Sox15_1/Jaspar

Match Rank:3
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--CTCAATTTTTCAA--
ANNTCTATTGTTCNNNA
 A C G T A C G T A G T C A C G T A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A G T C G T C A C G T A A C G T A C G T
C G T A C G T A T C G A A G C T G A T C G C A T C G T A C G A T C G A T C T A G C G A T G A C T G T A C G C T A G T A C G A C T C G T A

PB0145.1_Mafb_2/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTCAATTTTTCAA---
-ANATTTTTGCAANTN
 A G T C A C G T A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A G T C G T C A C G T A A C G T A C G T A C G T
A C G T C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

PB0070.1_Sox30_1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTCAATTTTTCAA-
ANNTCCATTGTTCNNN
 A C G T A C G T A G T C A C G T A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A G T C G T C A C G T A A C G T
C T G A C T G A C A G T C G A T A G T C G T A C G C T A A G C T C A G T T C A G C G A T A G C T T A G C G C T A C G A T G A C T

Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CTCAATTTTTCAA
-TGAATTATGCAT
 A G T C A C G T A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A G T C G T C A C G T A
A C G T C G A T C T A G G T C A G C T A C G A T G C A T G C T A C G A T C A T G G A T C G C T A C G A T

NFATC2/MA0152.1/Jaspar

Match Rank:7
Score:0.59
Offset:6
Orientation:forward strand
Alignment:CTCAATTTTTCAA
------TTTTCCA
 A G T C A C G T A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A G T C G T C A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C G A T A C G T G A C T A C G T G T A C A G T C G C T A

PB0066.1_Sox17_1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTCAATTTTTCAA
NNATNAATTGTTTNN
 A C G T A C G T A G T C A C G T A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A G T C G T C A C G T A
G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:9
Score:0.59
Offset:5
Orientation:forward strand
Alignment:CTCAATTTTTCAA--
-----ATTTTCCATT
 A G T C A C G T A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A G T C G T C A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

PB0074.1_Sox8_1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CTCAATTTTTCAA--
GTATCTATTGTTCTTTA
 A C G T A C G T A G T C A C G T A G T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A G T C G T C A C G T A A C G T A C G T
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A