Information for 13-CCTGGATGGC (Motif 28)

A G T C A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C C G T A A C G T A G T C A G T C C G T A A C T G A C T G
p-value:1e-3
log p-value:-8.201e+00
Information Content per bp:1.530
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.75%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.5 +/- 28.5bp
Average Position of motif in Background53.4 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Bcl6/MA0463.1/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CCTGGATGGC-
TTTCCTAGAAAGCA
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A C G T
C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A

PB0029.1_Hic1_1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-CCTGGATGGC-----
NGTAGGTTGGCATNNN
 A C G T A G T C A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:CCTGGATGGC-
-GTTAATGGCC
 A G T C A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A C G T
A C G T A T C G A G C T C A G T T C G A C T G A C G A T C A T G C T A G A T G C G A T C

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CCTGGATGGC--
CGTGGGTGGTCC
 A G T C A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A C G T A C G T
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCTGGATGGC--
TTTCCTGGAAAGNNN
 A C G T A C G T A C G T A G T C A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A C G T A C G T
G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

Hic1/MA0739.1/Jaspar

Match Rank:6
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:CCTGGATGGC--
---GGTTGGCAT
 A G T C A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

SPDEF/MA0686.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCTGGATGGC
ACCCGGATGTA
 A C G T A G T C A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C
C G T A T G A C T A G C G T A C T A C G C A T G C T G A G C A T T C A G G A C T C T G A

YY1/MA0095.2/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCTGGATGGC---
-CAAGATGGCGGC
 A G T C A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C A C G T A C G T A C G T
A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCTGGATGGC
CCWGGAATGY
 A G T C A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C
A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-CCTGGATGGC
ANCAGGATGT-
 A C G T A G T C A G T C A C G T A C T G A C T G C G T A A C G T A C T G A C T G A G T C
C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T A C G T