Information for 12-CAGGCAGGCAGGCBGH (Motif 22)

A G T C T C G A A T C G A C T G A G T C C G T A A C T G A C T G G T A C C T G A A C T G T A C G G T A C A C G T A C T G G C T A
Reverse Opposite:
C A G T A G T C T A C G A C T G A T G C A G T C A G C T A C T G A G T C A G T C A C G T A C T G G T A C A T G C A G C T C T A G
p-value:1e-6
log p-value:-1.512e+01
Information Content per bp:1.771
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif1.12%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.8 +/- 2.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CAGGCAGGCAGGCBGH
-TGGCAGNCTGCCAG-
 A G T C T C G A A T C G A C T G A G T C C G T A A C T G A C T G G T A C C T G A A C T G T A C G G T A C A C G T A C T G G C T A
A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CAGGCAGGCAGGCBGH
SCAGYCADGCATGAC--
 A C G T A G T C T C G A A T C G A C T G A G T C C G T A A C T G A C T G G T A C C T G A A C T G T A C G G T A C A C G T A C T G G C T A
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:3
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CAGGCAGGCAGGCBGH
---ACAGGAAGTG---
 A G T C T C G A A T C G A C T G A G T C C G T A A C T G A C T G G T A C C T G A A C T G T A C G G T A C A C G T A C T G G C T A
A C G T A C G T A C G T T C G A T A G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T T C A G A C G T A C G T A C G T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.54
Offset:2
Orientation:forward strand
Alignment:CAGGCAGGCAGGCBGH
--AACAGGAAGT----
 A G T C T C G A A T C G A C T G A G T C C G T A A C T G A C T G G T A C C T G A A C T G T A C G G T A C A C G T A C T G G C T A
A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T A C G T A C G T A C G T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CAGGCAGGCAGGCBGH
---VCAGGTRDRY---
 A G T C T C G A A T C G A C T G A G T C C G T A A C T G A C T G G T A C C T G A A C T G T A C G G T A C A C G T A C T G G C T A
A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:6
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CAGGCAGGCAGGCBGH
--NDCAGGAARTNN--
 A G T C T C G A A T C G A C T G A G T C C G T A A C T G A C T G G T A C C T G A A C T G T A C G G T A C A C G T A C T G G C T A
A C G T A C G T T G C A C T G A T A G C G T C A A C T G A C T G C G T A G C T A T C A G G A C T T C A G T A C G A C G T A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:7
Score:0.52
Offset:3
Orientation:forward strand
Alignment:CAGGCAGGCAGGCBGH
---ACAGGAAGTG---
 A G T C T C G A A T C G A C T G A G T C C G T A A C T G A C T G G T A C C T G A A C T G T A C G G T A C A C G T A C T G G C T A
A C G T A C G T A C G T T C G A T A G C T G C A A C T G A C T G C G T A C G T A C T A G G A C T T A C G A C G T A C G T A C G T

YY1(Zf)/Promoter/Homer

Match Rank:8
Score:0.52
Offset:4
Orientation:forward strand
Alignment:CAGGCAGGCAGGCBGH
----CAAGATGGCGGC
 A G T C T C G A A T C G A C T G A G T C C G T A A C T G A C T G G T A C C T G A A C T G T A C G G T A C A C G T A C T G G C T A
A C G T A C G T A C G T A C G T T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:9
Score:0.52
Offset:2
Orientation:forward strand
Alignment:CAGGCAGGCAGGCBGH
--AACCGGAAGT----
 A G T C T C G A A T C G A C T G A G T C C G T A A C T G A C T G G T A C C T G A A C T G T A C G G T A C A C G T A C T G G C T A
A C G T A C G T T C G A C T G A T A G C T G A C T C A G T C A G C G T A C G T A T C A G A G C T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.52
Offset:2
Orientation:reverse strand
Alignment:CAGGCAGGCAGGCBGH
--CACAGN--------
 A G T C T C G A A T C G A C T G A G T C C G T A A C T G A C T G G T A C C T G A A C T G T A C G G T A C A C G T A C T G G C T A
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T