Information for 2-GGAGCTCTGC (Motif 13)

T C A G A C T G G T C A T A C G A G T C A C G T A G T C A G C T A T C G A G T C
Reverse Opposite:
T C A G A T G C C T G A A C T G T G C A A C T G A T G C C A G T T G A C A G T C
p-value:1e-8
log p-value:-2.022e+01
Information Content per bp:1.719
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif8.61%
Number of Background Sequences with motif417.6
Percentage of Background Sequences with motif1.85%
Average Position of motif in Targets49.2 +/- 27.6bp
Average Position of motif in Background52.6 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0099.1_Zfp691_1/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----GGAGCTCTGC---
NNNNTGAGCACTGTNNG
 A C G T A C G T A C G T A C G T T C A G A C T G G T C A T A C G A G T C A C G T A G T C A G C T A T C G A G T C A C G T A C G T A C G T
G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GGAGCTCTGC------
AATCGCACTGCATTCCG
 A C G T T C A G A C T G G T C A T A C G A G T C A C G T A G T C A G C T A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.63
Offset:3
Orientation:forward strand
Alignment:GGAGCTCTGC
---GCTCCG-
 T C A G A C T G G T C A T A C G A G T C A C G T A G T C A G C T A T C G A G T C
A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T

PB0199.1_Zfp161_2/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GGAGCTCTGC-----
-NNGCNCTGCGCGGC
 T C A G A C T G G T C A T A C G A G T C A C G T A G T C A G C T A T C G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GGAGCTCTGC----
TGACCTTTGCCCTA
 T C A G A C T G G T C A T A C G A G T C A C G T A G T C A G C T A T C G A G T C A C G T A C G T A C G T A C G T
A G C T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G T G A C G A T C G A T C G A C T T C G A

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:6
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GGAGCTCTGC-----
---GCTCCGCCCMCY
 T C A G A C T G G T C A T A C G A G T C A C G T A G T C A G C T A T C G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GGAGCTCTGC-
-----GCTGTG
 T C A G A C T G G T C A T A C G A G T C A C G T A G T C A G C T A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.55
Offset:5
Orientation:forward strand
Alignment:GGAGCTCTGC-
-----GCTTCC
 T C A G A C T G G T C A T A C G A G T C A C G T A G T C A G C T A T C G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GGAGCTCTGC
--NGCTN---
 T C A G A C T G G T C A T A C G A G T C A C G T A G T C A G C T A T C G A G T C
A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGAGCTCTGC
CTGACCTTTG-
 A C G T T C A G A C T G G T C A T A C G A G T C A C G T A G T C A G C T A T C G A G T C
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T