Information for 1-CWCCSGCGGGTCTCCA (Motif 1)

G A T C C G T A A G T C A G T C A T G C C T A G G T A C C T A G A C T G A C T G A C G T A G T C A C G T A G T C A T G C G T C A
Reverse Opposite:
A C G T A T C G T A C G C G T A C T A G G T C A A G T C G T A C A G T C A C T G A G T C T A C G A C T G C T A G G C A T C A T G
p-value:1e-14
log p-value:-3.338e+01
Information Content per bp:1.688
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif3.00%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets37.0 +/- 27.3bp
Average Position of motif in Background54.3 +/- 8.1bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.56
Offset:7
Orientation:forward strand
Alignment:CWCCSGCGGGTCTCCA---
-------AGGTCTCTAACC
 G A T C C G T A A G T C A G T C A T G C C T A G G T A C C T A G A C T G A C T G A C G T A G T C A C G T A G T C A T G C G T C A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.54
Offset:5
Orientation:forward strand
Alignment:CWCCSGCGGGTCTCCA
-----VBSYGTCTGG-
 G A T C C G T A A G T C A G T C A T G C C T A G G T A C C T A G A C T G A C T G A C G T A G T C A C G T A G T C A T G C G T C A
A C G T A C G T A C G T A C G T A C G T T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:3
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:CWCCSGCGGGTCTCCA
----NRRGGGTCTT--
 G A T C C G T A A G T C A G T C A T G C C T A G G T A C C T A G A C T G A C T G A C G T A G T C A C G T A G T C A T G C G T C A
A C G T A C G T A C G T A C G T A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T

GCM1/MA0646.1/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CWCCSGCGGGTCTCCA
GTACCCGCATN------
 A C G T G A T C C G T A A G T C A G T C A T G C C T A G G T A C C T A G A C T G A C T G A C G T A G T C A C G T A G T C A T G C G T C A
T A C G A G C T T C G A T A G C T G A C G T A C C A T G A G T C C G T A A G C T T C A G A C G T A C G T A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.52
Offset:7
Orientation:forward strand
Alignment:CWCCSGCGGGTCTCCA
-------CTGTCTGG-
 G A T C C G T A A G T C A G T C A T G C C T A G G T A C C T A G A C T G A C T G A C G T A G T C A C G T A G T C A T G C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T

GCM2/MA0767.1/Jaspar

Match Rank:6
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CWCCSGCGGGTCTCCA
TACCCGCATN------
 G A T C C G T A A G T C A G T C A T G C C T A G G T A C C T A G A C T G A C T G A C G T A G T C A C G T A G T C A T G C G T C A
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A A C G T A C G T A C G T A C G T A C G T A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:7
Score:0.51
Offset:-3
Orientation:forward strand
Alignment:---CWCCSGCGGGTCTCCA
TCGTACCCGCATCATT---
 A C G T A C G T A C G T G A T C C G T A A G T C A G T C A T G C C T A G G T A C C T A G A C T G A C T G A C G T A G T C A C G T A G T C A T G C G T C A
G C A T T G A C T C A G C G A T T C G A G T A C G T A C G T A C A T C G A G T C C G T A A G C T T A G C C G T A G A C T C A G T A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CWCCSGCGGGTCTCCA
DCTCAGCAGG------
 G A T C C G T A A G T C A G T C A T G C C T A G G T A C C T A G A C T G A C T G A C G T A G T C A C G T A G T C A T G C G T C A
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:9
Score:0.50
Offset:7
Orientation:forward strand
Alignment:CWCCSGCGGGTCTCCA
-------TWGTCTGV-
 G A T C C G T A A G T C A G T C A T G C C T A G G T A C C T A G A C T G A C T G A C G T A G T C A C G T A G T C A T G C G T C A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T

PB0102.1_Zic2_1/Jaspar

Match Rank:10
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--CWCCSGCGGGTCTCCA
CCCCCCCGGGGGGGT---
 A C G T A C G T G A T C C G T A A G T C A G T C A T G C C T A G G T A C C T A G A C T G A C T G A C G T A G T C A C G T A G T C A T G C G T C A
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T A C G T A C G T A C G T