Information for 2-CWGGGTSGTKTGA (Motif 5)

A G T C C G A T A C T G A C T G A C T G A C G T A T G C A C T G A G C T C A T G A G C T A C T G C T G A
Reverse Opposite:
A G C T T A G C C T G A G T A C C T G A A G T C T A C G C G T A A G T C G T A C A G T C C G T A A C T G
p-value:1e-11
log p-value:-2.571e+01
Information Content per bp:1.763
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif2.94%
Number of Background Sequences with motif16.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets53.6 +/- 23.8bp
Average Position of motif in Background40.7 +/- 22.8bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.29
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CWGGGTSGTKTGA---
----GTGGCGTGACNG
 A G T C C G A T A C T G A C T G A C T G A C G T A T G C A C T G A G C T C A T G A G C T A C T G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G A C G T C A T G A C T G A T G C A T C G A C G T A T C G C T G A A G T C G A T C C A T G

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CWGGGTSGTKTGA
CGTGGGTGGTCC--
 A C G T A G T C C G A T A C T G A C T G A C T G A C G T A T G C A C T G A G C T C A T G A G C T A C T G C T G A
A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CWGGGTSGTKTGA-
----ATGGGGTGAT
 A G T C C G A T A C T G A C T G A C T G A C G T A T G C A C T G A G C T C A T G A G C T A C T G C T G A A C G T
A C G T A C G T A C G T A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T

SREBF1/MA0595.1/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CWGGGTSGTKTGA-
----GTGGGGTGAT
 A G T C C G A T A C T G A C T G A C T G A C G T A T G C A C T G A G C T C A T G A G C T A C T G C T G A A C G T
A C G T A C G T A C G T A C G T T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T

LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CWGGGTSGTKTGA
NRRGGGTCTT----
 A C G T A G T C C G A T A C T G A C T G A C T G A C G T A T G C A C T G A G C T C A T G A G C T A C T G C T G A
A C T G T C G A C T A G A C T G A C T G A C T G A C G T A G T C A C G T A G C T A C G T A C G T A C G T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CWGGGTSGTKTGA
CAGTGTGGTCGC-
 A G T C C G A T A C T G A C T G A C T G A C G T A T G C A C T G A G C T C A T G A G C T A C T G C T G A
G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CWGGGTSGTKTGA
GYCTGGYYTNTGTCA
 A C G T A C G T A G T C C G A T A C T G A C T G A C T G A C G T A T G C A C T G A G C T C A T G A G C T A C T G C T G A
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CWGGGTSGTKTGA
NNHTGTGGTTWN-
 A G T C C G A T A C T G A C T G A C T G A C G T A T G C A C T G A G C T C A T G A G C T A C T G C T G A
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:CWGGGTSGTKTGA-
----ATGGGGTGAT
 A G T C C G A T A C T G A C T G A C T G A C G T A T G C A C T G A G C T C A T G A G C T A C T G C T G A A C G T
A C G T A C G T A C G T A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T

PB0157.1_Rara_2/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:forward strand
Alignment:----CWGGGTSGTKTGA
AGAGCGGGGTCAAGTA-
 A C G T A C G T A C G T A C G T A G T C C G A T A C T G A C T G A C T G A C G T A T G C A C T G A G C T C A T G A G C T A C T G C T G A
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A A C G T