Information for 12-ACACTTGCCTGTCCTG (Motif 20)

C G T A A G T C C G T A A G T C A C G T C G A T A T C G A G T C A G T C A C G T A C T G C G A T A G T C A G T C A C G T A C T G
Reverse Opposite:
G T A C C G T A A C T G A C T G C G T A A G T C C G T A A C T G A C T G A T G C C G T A G T C A A C T G A C G T A C T G A C G T
p-value:1e-4
log p-value:-1.111e+01
Information Content per bp:1.928
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets33.0 +/- 25.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.71
Offset:0
Orientation:reverse strand
Alignment:ACACTTGCCTGTCCTG
NNACTTGCCTT-----
 C G T A A G T C C G T A A G T C A C G T C G A T A T C G A G T C A G T C A C G T A C T G C G A T A G T C A G T C A C G T A C T G
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T A C G T

HEY1/MA0823.1/Jaspar

Match Rank:2
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ACACTTGCCTGTCCTG
GACACGTGCC-------
 A C G T C G T A A G T C C G T A A G T C A C G T C G A T A T C G A G T C A G T C A C G T A C T G C G A T A G T C A G T C A C G T A C T G
T A C G T C G A A G T C T C G A A G T C A T C G A G C T C T A G A G T C T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Npas2/MA0626.1/Jaspar

Match Rank:3
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ACACTTGCCTGTCCTG
NACACGTGCN-------
 A C G T C G T A A G T C C G T A A G T C A C G T C G A T A T C G A G T C A G T C A C G T A C T G C G A T A G T C A G T C A C G T A C T G
A C T G T G C A A G T C C G T A A G T C A C T G A C G T A C T G A T G C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

HEY2/MA0649.1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-ACACTTGCCTGTCCTG
GGCACGTGNC-------
 A C G T C G T A A G T C C G T A A G T C A C G T C G A T A T C G A G T C A G T C A C G T A C T G C G A T A G T C A G T C A C G T A C T G
A T C G T C A G T A G C C T G A A T G C A C T G A G C T A C T G A G C T G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

RARA(var.2)/MA0730.1/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--ACACTTGCCTGTCCTG
TGACCTTTGCATGACCT-
 A C G T A C G T C G T A A G T C C G T A A G T C A C G T C G A T A T C G A G T C A G T C A C G T A C T G C G A T A G T C A G T C A C G T A C T G
G A C T T A C G T G C A T G A C G T A C A G C T A G C T G C A T T C A G T A G C C T G A A C G T C T A G T G C A T G A C G T A C A G C T A C G T

HES5/MA0821.1/Jaspar

Match Rank:6
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--ACACTTGCCTGTCCTG
CGGCACGTGCCA------
 A C G T A C G T C G T A A G T C C G T A A G T C A C G T C G A T A T C G A G T C A G T C A C G T A C T G C G A T A G T C A G T C A C G T A C T G
G A T C T C A G T C A G A G T C C T G A G A T C C T A G A G C T A C T G A G T C A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:7
Score:0.54
Offset:9
Orientation:reverse strand
Alignment:ACACTTGCCTGTCCTG-
---------TGACCTYA
 C G T A A G T C C G T A A G T C A C G T C G A T A T C G A G T C A G T C A C G T A C T G C G A T A G T C A G T C A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

Mlxip/MA0622.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:ACACTTGCCTGTCCTG
ACACGTGC--------
 C G T A A G T C C G T A A G T C A C G T C G A T A T C G A G T C A G T C A C G T A C T G C G A T A G T C A G T C A C G T A C T G
G T C A A G T C C G T A A G T C A C T G A C G T A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:ACACTTGCCTGTCCTG
NNACTTACCTN-----
 C G T A A G T C C G T A A G T C A C G T C G A T A T C G A G T C A G T C A C G T A C T G C G A T A G T C A G T C A C G T A C T G
C T G A G A C T G C T A G A T C G C A T G A C T C G T A A G T C G A T C G C A T A C T G A C G T A C G T A C G T A C G T A C G T

Hes2/MA0616.1/Jaspar

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:ACACTTGCCTGTCCTG
GCACGTGTCNNNN---
 C G T A A G T C C G T A A G T C A C G T C G A T A T C G A G T C A G T C A C G T A C T G C G A T A G T C A G T C A C G T A C T G
A C T G A G T C C G T A A G T C A C T G A G C T A C T G A G C T A T G C A C T G C G A T C G A T C G T A A C G T A C G T A C G T